RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SLC15A4Q8N697 577 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 TEX19Q8NA77 164 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF527Q8NB42 609 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PCSK9Q8NBP7 692 aaKnown RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 DNERQ8NFT8 737 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ST8SIA2Q92186 375 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF566Q969W8 418 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 LRRC37BQ96QE4 947 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 CPPED1Q9BRF8 314 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PAGR1Q9BTK6 254 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SIK2Q9H0K1 926 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 XPNPEP3Q9NQH7 507 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 TM7SF3Q9NS93 570 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PLA2G3Q9NZ20 509 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 MAN2B2Q9Y2E5 1009 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 TMX2Q9Y320 296 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SH3BP1Q9Y3L3 701 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLC30A1Q9Y6M5 507 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 DUSP10Q9Y6W6 482 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 TMEM233B4DJY2 109 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 LAMTOR5O43504 91 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 KCNQ3O43525 872 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 PRSS23O95084 383 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CSTBP04080 98 aaKnown RBP4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 GNAT2P19087 354 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 GCSHP23434 173 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 MGAT1P26572 445 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 VIPR2P41587 438 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CASP2P42575 452 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CARSP49589 748 aaKnown RBP4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 FOXO1Q12778 655 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 EFEMP1Q12805 493 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 FSTL1Q12841 308 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 BLMHQ13867 455 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CNGB1Q14028 1251 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 STARD3Q14849 445 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 AMOTQ4VCS5 1084 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 DCAF17Q5H9S7 520 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 FAM160B1Q5W0V3 765 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CCDC70Q6NSX1 233 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 LDHAL6AQ6ZMR3 332 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 KRT28Q7Z3Y7 464 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 TAX1BP1Q86VP1 789 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 GAS2L3Q86XJ1 694 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CACNA2D3Q8IZS8 1091 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 TXLNBQ8N3L3 684 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 SPATA5Q8NB90 893 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 TBC1D15Q8TC07 691 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 SPSB4Q96A44 273 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 BDH2Q9BUT1 245 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 MYLK2Q9H1R3 596 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZHX3Q9H4I2 956 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 NECTIN3Q9NQS3 549 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 ETAA1Q9NY74 926 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 XPR1Q9UBH6 696 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 HDAC5Q9UQL6 1122 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 LZTS1Q9Y250 596 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 CEP83Q9Y592 693 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 PCDHGB3Q9Y5G1 929 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 DGKBQ9Y6T7 804 aa4.48□□□□□ -1.69
HMGB1P15-201ENST00000453854 A0A087WZ62 844 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 NPC1O15118 1278 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 RAD17O75943 681 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 IPO13O94829 963 aaKnown RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 CYP2C9P11712 490 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 CKBP12277 381 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 MYL4P12829 197 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 XRCC6P12956 609 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 VEGFAP15692 232 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 GABRB3P28472 473 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 TOB1P50616 345 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 RENBPP51606 427 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 PLP2Q04941 152 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 FOXL1Q12952 345 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 ELAVL1Q15717 326 aaKnown RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 ELF2Q15723 593 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 NPY5RQ15761 445 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZACNQ401N2 412 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 CCDC38Q502W7 563 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 NAIF1Q69YI7 327 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 HTR3DQ70Z44 454 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 MED25Q71SY5 747 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 SYT12Q8IV01 421 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 FAM9BQ8IZU0 186 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 MYCT1Q8N699 235 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 RNF169Q8NCN4 708 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 PDPRQ8NCN5 879 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLC17A8Q8NDX2 589 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 CCT6BQ92526 530 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 C18orf8Q96DM3 657 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 SCLT1Q96NL6 688 aa4.47□□□□□ -1.69
HMGB1P15-201ENST00000453854 HEPHQ9BQS7 1158 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms