RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 AJAP1Q9UKB5 411 aaPredicted RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 ZNF263O14978 683 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 ZMYND10O75800 440 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 STAU1O95793 577 aaKnown RBP16.86■□□□□ 0.29
SNX17-204ENST00000453453 THP07101 528 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 GUCY2FP51841 1108 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 FAM189BP81408 668 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 ARID5AQ03989 594 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 GPNMBQ14956 572 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
SNX17-204ENST00000453453 SPOPLQ6IQ16 392 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 GLB1LQ6UWU2 654 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 ZNF598Q86UK7 904 aaKnown RBP16.86■□□□□ 0.29
SNX17-204ENST00000453453 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
SNX17-204ENST00000453453 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 LINC01599Q8WXQ3 324 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
SNX17-204ENST00000453453 HPDLQ96IR7 371 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 FAXDC2Q96IV6 333 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 ZFP42Q96MM3 310 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 ZNF560Q96MR9 790 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 NOX5Q96PH1 765 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 TMEM161AQ9NX61 479 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 LRFN2Q9ULH4 789 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 NUB1Q9Y5A7 615 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
SNX17-204ENST00000453453 MEIS3P2A8K0S8 358 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ENPP3O14638 875 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 PNPLA4P41247 253 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 TNNC1P63316 161 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 SMYD5Q6GMV2 418 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 LRRC52Q8N7C0 313 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 URGCPQ8TCY9 931 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ZIM3Q96PE6 472 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 XYLT2Q9H1B5 865 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 VRTNQ9H8Y1 702 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ACTR5Q9H9F9 607 aaPredicted RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 APOBEC3GQ9HC16 384 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 PCDHB7Q9Y5E2 793 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 CAPN6Q9Y6Q1 641 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ATP8B3O60423 1300 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 MICAL3Q7RTP6 2002 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 PTGESO14684 152 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 GFPT2O94808 682 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 SCNN1GP51170 649 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 GRIK3Q13003 919 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 IKBKEQ14164 716 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 C9orf57Q5W0N0 161 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 VPS36Q86VN1 386 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 TSEN2Q8NCE0 465 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 SHC3Q92529 594 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 KAT5Q92993 513 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 NXF1Q9UBU9 619 aaKnown RBP16.85■□□□□ 0.29
SNX17-204ENST00000453453 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
SNX17-204ENST00000453453 TET1Q8NFU7 2136 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 TMCO5BA8MYB1 307 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 FOXN3O00409 490 aaPredicted RBP16.84■□□□□ 0.29
SNX17-204ENST00000453453 HOXA2O43364 376 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 KRT5P13647 590 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 LSP1P33241 339 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 MAGEA1P43355 309 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 WDR72Q3MJ13 1102 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
SNX17-204ENST00000453453 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 CXorf38Q8TB03 319 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 P3H4Q92791 437 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 ELMO3Q96BJ8 720 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
SNX17-204ENST00000453453 MYH10P35580 1976 aa16.83■□□□□ 0.29
SNX17-204ENST00000453453 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 ANKRD65E5RJM6 399 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 INPPL1O15357 1258 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 AKR1B10O60218 316 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 EVI5O60447 810 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 MOCS3O95396 460 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 PFKMP08237 780 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 LRPAP1P30533 357 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 HSPA9P38646 679 aaKnown RBP16.83■□□□□ 0.28
SNX17-204ENST00000453453 EIF4A3P38919 411 aaKnown RBP16.83■□□□□ 0.28
SNX17-204ENST00000453453 PRKCIP41743 596 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 ASTE1Q2TB18 679 aaPredicted RBP16.83■□□□□ 0.28
SNX17-204ENST00000453453 SV2CQ496J9 727 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 FAM71AQ8IYT1 594 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 TTC39CQ8N584 583 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
SNX17-204ENST00000453453 ATP6V1G3Q96LB4 118 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 GDAP1L1Q96MZ0 367 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms