RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 ACAD10Q6JQN1 1059 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 FRA10AC1Q70Z53 315 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 NETO2Q8NC67 525 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 HASPINQ8TF76 798 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 KAT2BQ92831 832 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CPB2Q96IY4 423 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SMAD5Q99717 465 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 DRC3Q9H069 523 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 BLOC1S4Q9NUP1 217 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SEL1LQ9UBV2 794 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 HUS1O60921 280 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 RARAP10276 462 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 STMN1P16949 149 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 RPA1P27694 616 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 VHLP40337 213 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 ALDH5A1P51649 535 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 CASP7P55210 303 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 OTUD4Q01804 1114 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 CES3Q6UWW8 571 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 FEZF2Q8TBJ5 459 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 EME1Q96AY2 570 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 GDF3Q9NR23 364 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 BFARQ9NZS9 450 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SCHIP1Q9P0W5 487 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 SALL1Q9NSC2 1324 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 PXDNLA1KZ92 1463 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 PYGBP11216 843 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 PAN2Q504Q3 1202 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 EFHC2Q5JST6 749 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 ARMCX2Q7L311 632 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CDHR1Q96JP9 859 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 EGFL8Q99944 293 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SPATA31A5Q5VU36 1347 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SPATA31A7Q8IWB4 1347 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 AP1G2O75843 785 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CYP4F12Q9HCS2 524 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 STX18Q9P2W9 335 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 SAE1Q9UBE0 346 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 APPL1Q9UKG1 709 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 KDM6AO15550 1401 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 UNC13BO14795 1591 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CHEK2O96017 543 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 HSPA8P11142 646 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 CHKAP35790 457 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 MARCKSL1P49006 195 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CASP5P51878 434 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 KPNA2P52292 529 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 MIER2Q8N344 545 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 OR6J1Q8NGC5 347 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 OLFM3Q96PB7 478 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CCT7Q99832 543 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 PLEKHA5Q9HAU0 1116 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 MID2Q9UJV3 735 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 NEXMIFQ5QGS0 1516 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 XPOTO43592 962 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 SRP72O76094 671 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 KCNJ2P63252 427 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 OCA2Q04671 838 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 PCNX4Q63HM2 1172 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 TTC8Q8TAM2 541 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CAVIN3Q969G5 261 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 NAF1Q96HR8 494 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 MXRA8Q9BRK3 442 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SNX5Q9Y5X3 404 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 OVOS2A0A0G2JMS6 1433 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SMARCA1P28370 1054 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 SURF1Q15526 300 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 TMC3Q7Z5M5 1100 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 ROPN1BQ9BZX4 212 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 ROPN1Q9HAT0 212 aaPredicted RBP8.1□□□□□ -1.11
RIF1-206ENST00000453091 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.1□□□□□ -1.11
RIF1-206ENST00000453091 ZNF229Q9UJW7 825 aa8.1□□□□□ -1.11
RIF1-206ENST00000453091 MYO1GB0I1T2 1018 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 CYP11B1P15538 503 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 FGFR2P21802 821 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 RFC5P40937 340 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 CSE1LP55060 971 aaKnown RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 TCHHL1Q5QJ38 904 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 NBPF12Q5TAG4 269 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 AGAP11Q8TF27 550 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 RUBCNQ92622 972 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ZNF669Q96BR6 464 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ZNF512BQ96KM6 892 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 HAUS8Q9BT25 410 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 AGXT2Q9BYV1 514 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 MYOZ2Q9NPC6 264 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ZNRF3Q9ULT6 936 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 PLEKHG2Q9H7P9 1386 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 MLH1P40692 756 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms