RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 C2orf16Q68DN1 1984 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 MTMR11A4FU01 709 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 PPP1R3GB7ZBB8 358 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 GABRDO14764 452 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 SEC24AO95486 1093 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 FGF19O95750 216 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 OR4Q2P0C623 313 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 GCLMP48507 274 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 MXI1P50539 228 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 RPL10AP62906 217 aaKnown RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 DLG4P78352 724 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 TWF1Q12792 350 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 MGAT5BQ3V5L5 792 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 DCAF17Q5H9S7 520 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 INTS6LQ5JSJ4 861 aaKnown RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 PDZD4Q76G19 769 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 FRMD5Q7Z6J6 570 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 RNF135Q8IUD6 432 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 FAM84AQ96KN4 292 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 ABCB6Q9NP58 842 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 CTNND2Q9UQB3 1225 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
SMPD4-212ENST00000451542 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
SMPD4-212ENST00000451542 TRIM49BA6NDI0 452 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 A8MXQ7 604 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 DCXO43602 365 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 HLA-DRAP01903 254 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 CT47A1Q5JQC4 288 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 ATAD1Q8NBU5 361 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 NXPE3Q969Y0 559 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 FAXDC2Q96IV6 333 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 TNIP3Q96KP6 325 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 SYT15Q9BQS2 421 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 AVENQ9NQS1 362 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-212ENST00000451542 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 TSC2P49815 1807 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
SMPD4-212ENST00000451542 C2CD4DB7Z1M9 353 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 RHOP08100 348 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 PTMSP20962 102 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 BMP6P22004 513 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 STX17P56962 302 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 MCCD1P59942 119 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 LIMS2Q7Z4I7 341 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 GCNAQ96QF7 691 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 RTP3Q9BQQ7 232 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 CORO1BQ9BR76 489 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 GPR88Q9GZN0 384 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 DNMT3BQ9UBC3 853 aaKnown RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 MAGEC2Q9UBF1 373 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-212ENST00000451542 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 CDH7Q9ULB5 785 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
SMPD4-212ENST00000451542 MICAL2O94851 1124 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 VNN1O95497 513 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 LAMP2P13473 410 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 ANXA13P27216 316 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 NLRP12P59046 1061 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
SMPD4-212ENST00000451542 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
SMPD4-212ENST00000451542 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms