RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 DHX58Q96C10 678 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 NELL2Q99435 816 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 LPIN3Q9BQK8 851 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 EPC1Q9H2F5 836 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 TRPV4Q9HBA0 871 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 KBTBD4Q9NVX7 518 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 RBAKQ9NYW8 714 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 DSEQ9UL01 958 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 AGAP1Q9UPQ3 857 aa17.72■□□□□ 0.43
RPUSD3-209ENST00000451405 EXTL3O43909 919 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 CUTAO60888 179 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 YEATS4O95619 227 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 ITGB3P05106 788 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 ADRB1P08588 477 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 POLR2BP30876 1174 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 GDI1P31150 447 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 ALCAMQ13740 583 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 NT5DC4Q86YG4 428 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 THEM5Q8N1Q8 247 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 ZBTB44Q8NCP5 570 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 NOC3LQ8WTT2 800 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 PSMG2Q969U7 264 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 MKNK1Q9BUB5 465 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 TRIM9Q9C026 710 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 TMEM206Q9H813 350 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 BRD9Q9H8M2 597 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 TMLHEQ9NVH6 421 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 HSFX1Q9UBD0 423 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 ASB3Q9Y575 518 aa17.71■□□□□ 0.43
RPUSD3-209ENST00000451405 CACNA1GO43497 2377 aa17.71■□□□□ 0.42
RPUSD3-209ENST00000451405 HEPACAM2A8MVW5 462 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 PSMC3P17980 439 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 ATF6P18850 670 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 CASP1P29466 404 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 PKP1Q13835 747 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 SV2CQ496J9 727 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 TSSK4Q6SA08 328 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 MFSD6LQ8IWD5 586 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 GIPC2Q8TF65 315 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 DNASE1L2Q92874 299 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 LRRC3BQ96PB8 259 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 SLITRK6Q9H5Y7 841 aa17.7■□□□□ 0.42
RPUSD3-209ENST00000451405 GABRR2P28476 465 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 TUFMP49411 452 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 PPM1JQ5JR12 505 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 ZNF852Q6ZMS4 543 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 ARID3BQ8IVW6 561 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 ZNF687Q8N1G0 1237 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 GPD1LQ8N335 351 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 PDCL2Q8N4E4 241 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 CSGALNACT2Q8N6G5 542 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 CACTINQ8WUQ7 758 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 IRF7Q92985 503 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 CLDN23Q96B33 292 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 ATXN3LQ9H3M9 355 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 IL21Q9HBE4 155 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 SIX4Q9UIU6 781 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 L1RE1Q9UN81 338 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 MRPS17Q9Y2R5 130 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 COL4A2P08572 1712 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 PTPRJQ12913 1337 aa17.69■□□□□ 0.42
RPUSD3-209ENST00000451405 ARNTLO00327 626 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 LILRB5O75023 590 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 F13A1P00488 732 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 KCNA4P22459 653 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 SPEM2Q0P670 501 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 OSTM1Q86WC4 334 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 CBWD2Q8IUF1 395 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 IQUBQ8NA54 791 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 ZNF507Q8TCN5 953 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 DEPDC1BQ8WUY9 529 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 ZNF560Q96MR9 790 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 C7orf25Q9BPX7 421 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 FAM126AQ9BYI3 521 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 CUEDC2Q9H467 287 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 TRPV5Q9NQA5 729 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 PCDHA7Q9UN72 937 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
RPUSD3-209ENST00000451405 ZNF263O14978 683 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 POLR2DO15514 142 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 TGFB1I1O43294 461 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 HCRTO43612 131 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 KRT19P08727 400 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 PNPLA4P41247 253 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 GPR15P49685 360 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 NRLP54845 237 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 ASIC1P78348 528 aa17.67■□□□□ 0.42
RPUSD3-209ENST00000451405 CYP4F8P98187 520 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms