RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 TBX20Q9UMR3 447 aa14.6□□□□□ -0.07
RAPGEF3-205ENST00000449771 CNTNAP5Q8WYK1 1306 aa14.6□□□□□ -0.07
RAPGEF3-205ENST00000449771 HEATR9A2RTY3 570 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 CSE1LP55060 971 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 HDAC4P56524 1084 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 HIC1Q14526 733 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 CAPZA2P47755 286 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 MAP3K7CLP57077 242 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 RARS2Q5T160 578 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 DPF2Q92785 391 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ZBTB10Q96DT7 871 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 LRRC1Q9BTT6 524 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ADARB2Q9NS39 739 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 PSMC3IPQ9P2W1 217 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 RPA1P27694 616 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 HPCAP84074 193 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 KDSRQ06136 332 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 STK4Q13043 487 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 STX3Q13277 289 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 EDRF1Q3B7T1 1238 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 KIF2CQ99661 725 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 SEC24DO94855 1032 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 EPB42P16452 691 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 SLC9A1P19634 815 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 SPRP35270 261 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 MTFR1Q15390 333 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ZNF677Q86XU0 584 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 SLC16A10Q8TF71 515 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 WDCPQ9H6R7 721 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 HPS4Q9NQG7 708 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 SNX12Q9UMY4 172 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 PTK7Q13308 1070 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 PTK6Q13882 451 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ZNF555Q8NEP9 628 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 DPF3Q92784 378 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 PDLIM2Q96JY6 352 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 YME1L1Q96TA2 773 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 CDYLQ9Y232 598 aa14.59□□□□□ -0.07
RAPGEF3-205ENST00000449771 ALDH1A2O94788 518 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 NAB2Q15742 525 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 EPC2Q52LR7 807 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 TEX9Q8N6V9 391 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 FAM162AQ96A26 154 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 C17orf80Q9BSJ5 609 aa14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 SMG5Q9UPR3 1016 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 RNF17Q9BXT8 1623 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-205ENST00000449771 TCP11X1B4DZS4 312 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 SRP72O76094 671 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 PGK2P07205 417 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 HNRNPH1P31943 449 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 EPHX2P34913 555 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 ZNF484Q5JVG2 852 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 MFSD4BQ5TF39 518 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 KIAA2013Q8IYS2 634 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 BTN2A2Q8WVV5 523 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CHP1Q99653 195 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 EPC1Q9H2F5 836 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 A0A1B0GTH6 734 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 GAS2O43903 313 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CLASP2O75122 1294 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 EGFRP00533 1210 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CAP2P40123 477 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 BFSP2Q13515 415 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 POLD3Q15054 466 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 HIST2H2ACQ16777 129 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 HIST2H2AA3Q6FI13 130 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 GFM2Q969S9 779 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 ZFP42Q96MM3 310 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 MRPL1Q9BYD6 325 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 AGPAT5Q9NUQ2 364 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 F5H5T6 163 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 PLA2G4AP47712 749 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 ARMCX6Q7L4S7 300 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CARNMT1Q8N4J0 409 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 TFB1MQ8WVM0 346 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 ADNPQ9H2P0 1102 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 ZNF556Q9HAH1 456 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CAPN10Q9HC96 672 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 CFAP73A6NFT4 308 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 M0QYT0 321 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 AP1G2O75843 785 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 FKBP9O95302 570 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 SLC2A3P11169 496 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 COMTP21964 271 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 RAD23BP54727 409 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 TTC39BQ5VTQ0 682 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 FKBP9P1Q75LS8 142 aa14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-205ENST00000449771 SEPT8Q92599 483 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms