RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SNX24Q9Y343 169 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 FNTAP49354 379 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 KYAT1Q16773 422 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 TMEM35BQ8NCS4 154 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 KATNAL1Q9BW62 490 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 NXF3Q9H4D5 531 aaKnown RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 LRRC19Q9H756 370 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 PSTPIP1O43586 416 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 CALB1P05937 261 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 CDC42EP1Q00587 391 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 SGO2Q562F6 1265 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 KCTD16Q68DU8 428 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 NOTUMQ6P988 496 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 LRIG3Q6UXM1 1119 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 UBLCP1Q8WVY7 318 aaPredicted RBP17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 TWNKQ96RR1 684 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 ZNF518BQ9C0D4 1074 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 PCDHGC3Q9UN70 934 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 PIN4Q9Y237 131 aaKnown RBP17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 PTPN22Q9Y2R2 807 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 SCN1AP35498 2009 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 O00370 1275 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 AKAP5P24588 427 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 KCNJ1P48048 391 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 PLTPP55058 493 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 CEP85LQ5SZL2 805 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
AP000253.1-201ENST00000449339 H0YGN5 161 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 PPEF2O14830 753 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 CD19P15391 556 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 ACTN2P35609 894 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 GJA9P57773 515 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 TAS2R40P59535 323 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 CACNB2Q08289 660 aaPredicted RBP17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 WDTC1Q8N5D0 677 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 FBXO25Q8TCJ0 367 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 C1orf54Q8WWF1 131 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 HHIPL1Q96JK4 782 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 CEP83Q9Y592 693 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 NFS1Q9Y697 457 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 ELNP15502 786 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 HOXC8P31273 242 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 GBP1P32455 592 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 CDH5P33151 784 aaPredicted RBP17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 MAN1A1P33908 653 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 RPL21P46778 160 aaKnown RBP17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 RAD23BP54727 409 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 CCDC50Q8IVM0 306 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 SH2D3CQ8N5H7 860 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 MAIP1Q8WWC4 291 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 C18orf25Q96B23 403 aaPredicted RBP17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 SNX27Q96L92 541 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 TUBGCP4Q9UGJ1 667 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 IP6K2Q9UHH9 426 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 ATP8A1Q9Y2Q0 1164 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 RALGAPA2Q2PPJ7 1873 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
AP000253.1-201ENST00000449339 HTTP42858 3142 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 TMEM191CA6NGB0 347 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 GOLGA6L10A6NI86 522 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 ECEL1O95672 775 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 CCND3P30281 292 aaPredicted RBP17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 SSR1P43307 286 aaKnown RBP17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 DENND1BQ6P3S1 775 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 DNAJC24Q6P3W2 148 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 LEKR1Q6ZMV7 388 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 WNT8BQ93098 351 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 FAXDC2Q96IV6 333 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 HERPUD2Q9BSE4 406 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 MTG1Q9BT17 334 aaPredicted RBP17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 TXLNGYQ9BZA5 131 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 ELOVL4Q9GZR5 314 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 RNF186Q9NXI6 227 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 ITGA11Q9UKX5 1188 aa17.03■□□□□ 0.32
AP000253.1-201ENST00000449339 TCRBV5S1A1TA0A578 114 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 RECQL4O94761 1208 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ATICP31939 592 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms