RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 DNAJC6O75061 913 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 PGM3O95394 542 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 OCM2P0CE71 109 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 OCMP0CE72 109 aaPredicted RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CDH3P22223 829 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 FGFR4P22455 802 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 LONP1P36776 959 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 UBA7P41226 1012 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 PHKA2P46019 1235 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TRAPPC10P48553 1259 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 NUP107P57740 925 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 POLR2FP61218 127 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SPCS2Q15005 226 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 C6orf183Q5T699 404 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TMEM214Q6NUQ4 689 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SLC30A10Q6XR72 485 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 DEFB132Q7Z7B7 95 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 LRRC6Q86X45 466 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 RHOT2Q8IXI1 618 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 AHI1Q8N157 1196 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ANKRD35Q8N283 1001 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 FLAD1Q8NFF5 587 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TPCN2Q8NHX9 752 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ZFP28Q8NHY6 868 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 BORCS5Q969J3 196 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 HES6Q96HZ4 224 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TRIM55Q9BYV6 548 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 KLHL4Q9C0H6 718 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 C17orf75Q9HAS0 396 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ZNF287Q9HBT7 754 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 PALMDQ9NP74 551 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 UBN1Q9NPG3 1134 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 IGKV6D-41A0A0C4DH26 115 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 FAM47DPA6NHR8 397 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 YDJCA8MPS7 323 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 OR52Z1P0C646 297 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 EEF2P13639 858 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 PCSK6P29122 969 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 GNA11P29992 359 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 EIF2B2P49770 351 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MXI1P50539 228 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ACTR3P61158 418 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CREB5Q02930 508 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ZNF543Q08ER8 600 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 APOFQ13790 326 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MPP2Q14168 576 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SPARCL1Q14515 664 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 NR1D2Q14995 579 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ECM1Q16610 540 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 PDK4Q16654 411 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 TRIM71Q2Q1W2 868 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MYLK3Q32MK0 819 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 DYMQ7RTS9 669 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 KCNK18Q7Z418 384 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 NEK8Q86SG6 692 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 DHDDSQ86SQ9 333 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SCYL3Q8IZE3 742 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 REXO1Q8N1G1 1221 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CACTIN-AS1Q8N1I8 211 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 METTL25Q8N6Q8 603 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 CCDC110Q8TBZ0 833 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SLC39A3Q9BRY0 314 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 Q9H521 79 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 RIOX1Q9H6W3 641 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 C6orf50Q9HD87 102 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MLXIPLQ9NP71 852 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 MTUS1Q9ULD2 1270 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.87□□□□□ -1.15
TRIM49C-201ENST00000448984 KMOO15229 486 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 PEX1O43933 1283 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 CSDE1O75534 798 aaKnown RBP7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 RAD17O75943 681 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 TNFAIP8O95379 198 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 NAT2P11245 290 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 CREB1P16220 341 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 VCLP18206 1134 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 AMPD1P23109 780 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 CHRNA3P32297 505 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 PGM1P36871 562 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 NR1H2P55055 460 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 LRRC63Q05C16 580 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 NR1H3Q13133 447 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 MMEL1Q495T6 779 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 DACT2Q5SW24 774 aa7.86□□□□□ -1.15
TRIM49C-201ENST00000448984 ARL6IP4Q66PJ3 421 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms