RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 LMO2P25791 158 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 LHX1P48742 406 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 MYL6P60660 151 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 DLG4P78352 724 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 MYL7Q01449 175 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 TSPY1Q01534 308 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 NFIL3Q16649 462 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 DNAJB7Q7Z6W7 309 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 ADGRF2Q8IZF7 708 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 FBXL6Q8N531 539 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 SPATA18Q8TC71 538 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 GSDMAQ96QA5 445 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 PKMYT1Q99640 499 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 SEPT5Q99719 369 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 FRMD4BQ9Y2L6 1034 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 PCDHA5Q9Y5H7 936 aa13.67□□□□□ -0.22
PRPF40A-203ENST00000448428 PHACTR2O75167 634 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ATP2C2O75185 946 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 GJA1P17302 382 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ATF6P18850 670 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 NR2F2P24468 414 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 PRCPP42785 496 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 AP3M2P53677 418 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 TRPC3Q13507 836 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 MGAT5BQ3V5L5 792 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ZCWPW2Q504Y3 356 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 TMC8Q8IU68 726 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 KBTBD7Q8WVZ9 684 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ZSWIM3Q96MP5 696 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 MMS19Q96T76 1030 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 RMND1Q9NWS8 449 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 CHMP5Q9NZZ3 219 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 GTF3C4Q9UKN8 822 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 PCDHB5Q9Y5E4 795 aa13.66□□□□□ -0.22
PRPF40A-203ENST00000448428 KMT2EQ8IZD2 1858 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 MAPK13O15264 365 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 AKAP3O75969 853 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 SMC2O95347 1197 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 VNN1O95497 513 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 CFHP08603 1231 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 PDGFRBP09619 1106 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 SRFP11831 508 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 WARSP23381 471 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 RPL13P26373 211 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 PCSK1P29120 753 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ATICP31939 592 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ADAM9Q13443 819 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 BIRC3Q13489 604 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 TEAD2Q15562 447 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 CCDC142Q17RM4 750 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 TANGO2Q6ICL3 276 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 FAM171BQ6P995 826 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ITIH5Q86UX2 942 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 SHKBP1Q8TBC3 707 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 SMARCE1Q969G3 411 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 ELMO3Q96BJ8 720 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 PLA2G2FQ9BZM2 168 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 WNT16Q9UBV4 365 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 FBXL21Q9UKT6 434 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 HCN4Q9Y3Q4 1203 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
PRPF40A-203ENST00000448428 A0A1W2PRU2 124 aa13.64□□□□□ -0.23
PRPF40A-203ENST00000448428 IKBKBO14920 756 aa13.64□□□□□ -0.23
PRPF40A-203ENST00000448428 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms