RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
ERCC6-203ENST00000447839 RSPH3Q86UC2 560 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 RHOT1Q8IXI2 618 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 FAXDC2Q96IV6 333 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 NT5C1AQ9BXI3 368 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 O00370 1275 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 PIK3R2O00459 728 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 IGHA2P01877 340 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 TAS2R40P59535 323 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 PSMC1P62191 440 aaKnown RBP12.4□□□□□ -0.42
ERCC6-203ENST00000447839 SP3Q02447 781 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 PTPN20Q4JDL3 420 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 STRIP2Q9ULQ0 834 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
ERCC6-203ENST00000447839 DERAQ9Y315 318 aa12.4□□□□□ -0.42
ERCC6-203ENST00000447839 H3BQF6 201 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 KIF3CO14782 793 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 PHF2O75151 1096 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 VDRP11473 427 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 ATF7P17544 494 aaPredicted RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CCND3P30281 292 aaPredicted RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 PRELID2Q8N945 189 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 C12orf29Q8N999 325 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 IPPQ9Y573 584 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 GOLGA6BA6NDN3 693 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RPS6KA5O75582 802 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 ASGR1P07306 291 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 SNX1Q13596 522 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CPXM1Q96SM3 734 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 GOLGA2P5Q9HBQ8 144 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CNTN3Q9P232 1028 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 F8VP50 259 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RARAP10276 462 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 KRT3P12035 628 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CHRNA3P32297 505 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CDH5P33151 784 aaPredicted RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 CUL1Q13616 776 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 ACOT1Q86TX2 421 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 HHIPL1Q96JK4 782 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RUFY1Q96T51 708 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 VIPAS39Q9H9C1 493 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 FAM49BQ9NUQ9 324 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RNF186Q9NXI6 227 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
ERCC6-203ENST00000447839 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
ERCC6-203ENST00000447839 XPOTO43592 962 aaKnown RBP12.38□□□□□ -0.43
ERCC6-203ENST00000447839 TRPA1O75762 1119 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 KCNJ1P48048 391 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 KCNA10Q16322 511 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 ZDHHC14Q8IZN3 488 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 C3orf20Q8ND61 904 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 CAPNS2Q96L46 248 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 CAP1Q01518 475 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 ZBTB6Q15916 424 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 CNGA2Q16280 664 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 ATP13A4Q4VNC1 1196 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 TTC39CQ8N584 583 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 GOLGA6L1Q8N7Z2 621 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 RIN2Q8WYP3 895 aaPredicted RBP12.38□□□□□ -0.43
ERCC6-203ENST00000447839 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
ERCC6-203ENST00000447839 TSPAN16Q9UKR8 245 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 TRPV2Q9Y5S1 764 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 TRIP11Q15643 1979 aa12.38□□□□□ -0.43
ERCC6-203ENST00000447839 PI4K2BG5E9Z4 385 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 PSTPIP1O43586 416 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 HSF2BPO75031 334 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 CD4P01730 458 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 PSMA2P25787 234 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 RFC1P35251 1148 aaPredicted RBP12.37□□□□□ -0.43
ERCC6-203ENST00000447839 CETN2P41208 172 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 TAP1Q03518 808 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 INCA1Q0VD86 236 aa12.37□□□□□ -0.43
ERCC6-203ENST00000447839 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms