RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 NOMO3P69849 1222 aa26.46■■□□□ 1.83
RFFL-206ENST00000447669 CNKSR3Q6P9H4 555 aa26.46■■□□□ 1.83
RFFL-206ENST00000447669 C1orf131Q8NDD1 294 aaKnown RBP26.46■■□□□ 1.83
RFFL-206ENST00000447669 GOLPH3Q9H4A6 298 aa26.46■■□□□ 1.83
RFFL-206ENST00000447669 MYO1AQ9UBC5 1043 aa26.46■■□□□ 1.83
RFFL-206ENST00000447669 PRG3Q9Y2Y8 225 aaPredicted RBP26.46■■□□□ 1.83
RFFL-206ENST00000447669 PBX3P40426 434 aa26.45■■□□□ 1.82
RFFL-206ENST00000447669 OR1G1P47890 313 aa26.45■■□□□ 1.82
RFFL-206ENST00000447669 DSC1Q08554 894 aa26.45■■□□□ 1.82
RFFL-206ENST00000447669 PTPROQ16827 1216 aa26.45■■□□□ 1.82
RFFL-206ENST00000447669 FAM117BQ6P1L5 589 aa26.45■■□□□ 1.82
RFFL-206ENST00000447669 FNDC1Q4ZHG4 1894 aaPredicted RBP26.45■■□□□ 1.82
RFFL-206ENST00000447669 ANKRD62A6NC57 917 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 TBKBP1A7MCY6 615 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 NOP2P46087 812 aaKnown RBP26.44■■□□□ 1.82
RFFL-206ENST00000447669 PSMC1P62191 440 aaKnown RBP26.44■■□□□ 1.82
RFFL-206ENST00000447669 PPP1R26Q5T8A7 1209 aaPredicted RBP26.44■■□□□ 1.82
RFFL-206ENST00000447669 UBA3Q8TBC4 463 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 SNX25Q9H3E2 840 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 CYTH4Q9UIA0 394 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 STXBP5LQ9Y2K9 1186 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 ENC1O14682 589 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 TACC1O75410 805 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 MFSD5Q6N075 450 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 SLC35G2Q8TBE7 412 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 CTNNBL1Q8WYA6 563 aaPredicted RBP26.44■■□□□ 1.82
RFFL-206ENST00000447669 NRDE2Q9H7Z3 1164 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 COG5Q9UP83 839 aa26.44■■□□□ 1.82
RFFL-206ENST00000447669 TMEM253P0C7T8 217 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 DEFB103AP81534 67 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 KIAA0319Q5VV43 1072 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 TOP6BLQ8N6T0 577 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 C11orf70Q9BRQ4 267 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 TJP2Q9UDY2 1190 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 O00370 1275 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 MICAL2O94851 1124 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 CENPCQ03188 943 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 SGO2Q562F6 1265 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 NPAS4Q8IUM7 802 aa26.43■■□□□ 1.82
RFFL-206ENST00000447669 DDX27Q96GQ7 796 aaKnown RBP26.43■■□□□ 1.82
RFFL-206ENST00000447669 FAM193BQ96PV7 902 aaPredicted RBP26.43■■□□□ 1.82
RFFL-206ENST00000447669 NT5C1B-RDH14C9J2C7 533 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 VDRP11473 427 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 CCDC130P13994 396 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 CASQ1P31415 396 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 NSFP46459 744 aaKnown RBP26.42■■□□□ 1.82
RFFL-206ENST00000447669 AARSP49588 968 aaKnown RBP eCLIP26.42■■□□□ 1.82
RFFL-206ENST00000447669 BCAR1P56945 870 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 MMS22LQ6ZRQ5 1243 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 OTOP2Q7RTS6 562 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 MCOLN2Q8IZK6 566 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 ZNF653Q96CK0 615 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 INTUQ9ULD6 942 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 PCDHGC3Q9UN70 934 aa26.42■■□□□ 1.82
RFFL-206ENST00000447669 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.42■■□□□ 1.82
RFFL-206ENST00000447669 DCLRE1AQ6PJP8 1040 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 KIF18AQ8NI77 898 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 KANSL3Q9P2N6 904 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 TSPAN16Q9UKR8 245 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 M0QYV0 167 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 PALMO75781 387 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 WARSP23381 471 aaKnown RBP26.41■■□□□ 1.82
RFFL-206ENST00000447669 RFC2P35250 354 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 GPC5P78333 572 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 MON1BQ7L1V2 547 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 C16orf59Q7L2K0 433 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 NOX5Q96PH1 765 aa26.41■■□□□ 1.82
RFFL-206ENST00000447669 DDX43Q9NXZ2 648 aaKnown RBP26.41■■□□□ 1.82
RFFL-206ENST00000447669 KIF2AO00139 706 aaPredicted RBP26.4■■□□□ 1.82
RFFL-206ENST00000447669 GJB6O95452 261 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 RRM1P23921 792 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 UNC93AQ86WB7 457 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 TXLNBQ8N3L3 684 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 TMEM199Q8N511 208 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 RSPH1Q8WYR4 309 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 UROC1Q96N76 676 aa26.4■■□□□ 1.82
RFFL-206ENST00000447669 TULP2O00295 520 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 PIK3R2O00459 728 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 GABRDO14764 452 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 MED7O43513 233 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 SYN1P17600 705 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 PTP4A2Q12974 167 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 CNGA2Q16280 664 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 GOLGA7BQ2TAP0 167 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 TRIM72Q6ZMU5 477 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 C7orf61Q8IZ16 206 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 TTC39CQ8N584 583 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 BADQ92934 168 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 BTBD6Q96KE9 485 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 ADAM22Q9P0K1 906 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 CNOT8Q9UFF9 292 aaKnown RBP26.39■■□□□ 1.82
RFFL-206ENST00000447669 LTBP2Q14767 1821 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 NCANO14594 1321 aa26.39■■□□□ 1.82
RFFL-206ENST00000447669 GRID2IPA4D2P6 1211 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 NRP1O14786 923 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 NCK2O43639 380 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 PFKMP08237 780 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 ADORA2BP29275 332 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 CYP4A22Q5TCH4 519 aa26.39■■□□□ 1.81
RFFL-206ENST00000447669 RFFLQ8WZ73 363 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms