RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.48■□□□□ 0.55
SMC6-206ENST00000446852 RASAL2Q9UJF2 1139 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 SNX24Q9Y343 169 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 PPEF2O14830 753 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 KRT14P02533 472 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 HSD17B3P37058 310 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
SMC6-206ENST00000446852 FNTAP49354 379 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 INCA1Q0VD86 236 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 SNX17Q15036 470 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 FSCN1Q16658 493 aaKnown RBP18.48■□□□□ 0.55
SMC6-206ENST00000446852 SGO2Q562F6 1265 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 DCUN1D2Q6PH85 259 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 CCDC105Q8IYK2 499 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 EXOC4Q96A65 974 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 CPXM1Q96SM3 734 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 RUFY1Q96T51 708 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 PLEKHA5Q9HAU0 1116 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 GRHL1Q9NZI5 618 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 TUBGCP4Q9UGJ1 667 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 Q9Y3F1 56 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 F8VP50 259 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 RALAP11233 206 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 INHBEP58166 350 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 ZDHHC24Q6UX98 284 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 TMC3Q7Z5M5 1100 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 CCDC50Q8IVM0 306 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 TRPV1Q8NER1 839 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 ATG4AQ8WYN0 398 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 ARL8AQ96BM9 186 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 CHST7Q9NS84 486 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 RNF19AQ9NV58 838 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 KLHL11Q9NVR0 708 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMC6-206ENST00000446852 MYADML2A6NDP7 307 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 MICAL2O94851 1124 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 RPL21P46778 160 aaKnown RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 NDST1P52848 882 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 DRG2P55039 364 aaKnown RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 KLF1Q13351 362 aaPredicted RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 ATP13A4Q4VNC1 1196 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 TTMPQ5BVD1 217 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 GLRA4Q5JXX5 417 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 C18orf25Q96B23 403 aaPredicted RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 ZIC5Q96T25 663 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 HEMGNQ9BXL5 484 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 BARX2Q9UMQ3 279 aaPredicted RBP18.47■□□□□ 0.55
SMC6-206ENST00000446852 PASKQ96RG2 1323 aa18.47■□□□□ 0.55
SMC6-206ENST00000446852 GOLGA8SH3BPF8 625 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 PODXLO00592 558 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 OPA1O60313 960 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 PCBP1Q15365 356 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMC6-206ENST00000446852 ZBTB6Q15916 424 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 ZNF771Q7L3S4 317 aaPredicted RBP18.46■□□□□ 0.55
SMC6-206ENST00000446852 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
SMC6-206ENST00000446852 EXD1Q8NHP7 514 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 LRRC45Q96CN5 670 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 FMO2Q99518 471 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 PIN4Q9Y237 131 aaKnown RBP18.46■□□□□ 0.55
SMC6-206ENST00000446852 PLAAQ9Y263 795 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 R3HDM2Q9Y2K5 976 aaKnown RBP18.46■□□□□ 0.55
SMC6-206ENST00000446852 DERAQ9Y315 318 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 RECQL4O94761 1208 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 HOXC8P31273 242 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 TAP1Q03518 808 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 SNX1Q13596 522 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 ALKAL1Q6UXT8 129 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
SMC6-206ENST00000446852 C17orf102A2RUQ5 167 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 ERBB2P04626 1255 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 CYP3A5P20815 502 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 AKAP5P24588 427 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 RFC1P35251 1148 aaPredicted RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 TXNRD3NBQ6F5E7 133 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA6L1Q8N7Z2 621 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 JOSD2Q8TAC2 188 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 FBXO25Q8TCJ0 367 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 HEXIM2Q96MH2 286 aaKnown RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 RUNDC3BQ96NL0 473 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 APOL6Q9BWW8 343 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 TRIM6Q9C030 488 aaPredicted RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 HTTP42858 3142 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA6CA6NDK9 693 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA8KD6RF30 607 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 M0QYV0 167 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA6DP0CG33 693 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 VDRP11473 427 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 AKR1A1P14550 325 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 YARSP54577 528 aaKnown RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 PLTPP55058 493 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 PSMC1P62191 440 aaKnown RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 DHX9Q08211 1270 aaKnown RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 MYO1EQ12965 1108 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 DPH6Q7L8W6 267 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 XYLT1Q86Y38 959 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 NIPA2Q8N8Q9 360 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 SLCO2A1Q92959 643 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms