RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 GPC2Q8N158 579 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 C17orf53Q8N3J3 647 aaPredicted RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 SPATA18Q8TC71 538 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 CCDC126Q96EE4 140 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 TRIM9Q9C026 710 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 KCNH7Q9NS40 1196 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 TBX20Q9UMR3 447 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 PIP4K2CQ8TBX8 421 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 REEP2Q9BRK0 252 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 EHD4Q9H223 541 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
FN1-212ENST00000446046 NALCNQ8IZF0 1738 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 RTN3O95197 1032 aaPredicted RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 GOLGA7BQ2TAP0 167 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 RNF168Q8IYW5 571 aaPredicted RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 ST13P4Q8IZP2 240 aaPredicted RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 RRN3Q9NYV6 651 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.24□□□□□ -0.45
FN1-212ENST00000446046 FRMD3A2A2Y4 597 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 ATP9BO43861 1147 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 OAZ1P54368 228 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 NFIAQ12857 509 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 DSG4Q86SJ6 1040 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
FN1-212ENST00000446046 SNX31Q8N9S9 440 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 GMCL1P1Q8NEA9 526 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 SLC39A10Q9ULF5 831 aa12.24□□□□□ -0.45
FN1-212ENST00000446046 CABYRO75952 493 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 ERVK-10P10266 1014 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 GPD1P21695 349 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 AXLP30530 894 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 AVPR1AP37288 418 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 MCEEQ96PE7 176 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 FDFT1P37268 417 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 PEX6Q13608 980 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 PCBP1Q15365 356 aaKnown RBP eCLIP12.23□□□□□ -0.451e-61■□□□□ 8.9
FN1-212ENST00000446046 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 MRPL48Q96GC5 212 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 CPVLQ9H3G5 476 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 NOVA2Q9UNW9 492 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 SMG5Q9UPR3 1016 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 A0A0G2JND7 137 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 PKP1Q13835 747 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 INPP5AQ14642 412 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 GRAMD1BQ3KR37 738 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 RARS2Q5T160 578 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 ABHD16BQ9H3Z7 469 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 TRPM5Q9NZQ8 1165 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 NCKAP1Q9Y2A7 1128 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 A0A087WZ62 844 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 ZC3H11AO75152 810 aaKnown RBP eCLIP12.23□□□□□ -0.452e-43■□□□□ 8.4
FN1-212ENST00000446046 NTSR2O95665 410 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 CAPZA2P47755 286 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 FNTAP49354 379 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 ZNF284Q2VY69 593 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 PLA2G4FQ68DD2 849 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 MFSD1Q9H3U5 465 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 RAB6BQ9NRW1 208 aa12.23□□□□□ -0.45
FN1-212ENST00000446046 XPO7Q9UIA9 1087 aaKnown RBP12.23□□□□□ -0.45
FN1-212ENST00000446046 FKBP1AP62942 108 aaKnown RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 ZBED8Q8IZ13 594 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 CD274Q9NZQ7 290 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 STK39Q9UEW8 545 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 CRLS1Q9UJA2 301 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 PLAAQ9Y263 795 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 FHOD1Q9Y613 1164 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 RPN2P04844 631 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 TRIM4Q9C037 500 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 ZFP69BQ9UJL9 534 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 SNAP23O00161 211 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 NCAM2O15394 837 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 CYP26A1O43174 497 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 PCNX4Q63HM2 1172 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 RBBP8NLQ8NC74 664 aaPredicted RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 NAT9Q9BTE0 207 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 PHF20Q9BVI0 1012 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 MRPL1Q9BYD6 325 aaKnown RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 NLNQ9BYT8 704 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 ZCCHC2Q9C0B9 1178 aaKnown RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 ARHGAP23Q9P227 1491 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 IZUMO3Q5VZ72 239 aa12.22□□□□□ -0.45
FN1-212ENST00000446046 FMR1NBQ8N0W7 255 aaPredicted RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 MCCC1Q96RQ3 725 aaPredicted RBP12.22□□□□□ -0.45
FN1-212ENST00000446046 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms