RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 EPHA5P54756 1037 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 MYL6P60660 151 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 INTS6LQ5JSJ4 861 aaKnown RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 ZNF658Q5TYW1 1059 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 IQCEQ6IPM2 695 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 PDZD4Q76G19 769 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 BMP8AQ7Z5Y6 402 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 TMC8Q8IU68 726 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 DCP1BQ8IZD4 617 aaKnown RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 SLC44A3Q8N4M1 653 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 SPATA18Q8TC71 538 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 SMARCE1Q969G3 411 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 ELMO3Q96BJ8 720 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 MCRS1Q96EZ8 462 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 SEPT5Q99719 369 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 ACBD6Q9BR61 282 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 XYLT2Q9H1B5 865 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 ABI2Q9NYB9 513 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 FRMD4BQ9Y2L6 1034 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 TRIOO75962 3097 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 VNN1O95497 513 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 MYL4P12829 197 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 GJA1P17302 382 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 EPHB3P54753 998 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 MYL7Q01449 175 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 TSPY1Q01534 308 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 PLD1Q13393 1074 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 MGAT5BQ3V5L5 792 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 SPPL2BQ8TCT7 592 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 TMC2Q8TDI7 906 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 C2orf15Q8WU43 125 aaKnown RBP20.14■□□□□ 0.81
HDAC4-203ENST00000445704 NXPE3Q969Y0 559 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 MMS19Q96T76 1030 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 LPIN3Q9BQK8 851 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 ZNF334Q9HCZ1 680 aaPredicted RBP20.14■□□□□ 0.81
HDAC4-203ENST00000445704 ASAH2Q9NR71 780 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 NME7Q9Y5B8 376 aa20.14■□□□□ 0.81
HDAC4-203ENST00000445704 MAPK13O15264 365 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 KINO60870 393 aaKnown RBP20.13■□□□□ 0.81
HDAC4-203ENST00000445704 PHACTR2O75167 634 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 SMC2O95347 1197 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 STAU1O95793 577 aaKnown RBP20.13■□□□□ 0.81
HDAC4-203ENST00000445704 HAPLN1P10915 354 aaPredicted RBP20.13■□□□□ 0.81
HDAC4-203ENST00000445704 LMO2P25791 158 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 ALDH1A3P47895 512 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 LHX1P48742 406 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 AP3M2P53677 418 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 SMARCB1Q12824 385 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 BIRC3Q13489 604 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 TRPC3Q13507 836 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 COBLL1Q53SF7 1204 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 CYP4A22Q5TCH4 519 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 ELOA2Q8IYF1 753 aaPredicted RBP20.13■□□□□ 0.81
HDAC4-203ENST00000445704 PSMG2Q969U7 264 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 PBXIP1Q96AQ6 731 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 EEF2KMTQ96G04 330 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 MRPL45Q9BRJ2 306 aaKnown RBP20.13■□□□□ 0.81
HDAC4-203ENST00000445704 PI4K2AQ9BTU6 479 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 GTF3C4Q9UKN8 822 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 PCDHB5Q9Y5E4 795 aa20.13■□□□□ 0.81
HDAC4-203ENST00000445704 ZNF197O14709 1029 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 ATP2C2O75185 946 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 WARSP23381 471 aaKnown RBP20.12■□□□□ 0.81
HDAC4-203ENST00000445704 TUFMP49411 452 aaKnown RBP20.12■□□□□ 0.81
HDAC4-203ENST00000445704 GPR15P49685 360 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 VAMP7P51809 220 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 ADAM9Q13443 819 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 NCOA4Q13772 614 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 EDRF1Q3B7T1 1238 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 ZACNQ401N2 412 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 ISM2Q6H9L7 571 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 DNAJB7Q7Z6W7 309 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-203ENST00000445704 FAM186BQ8IYM0 893 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 SHKBP1Q8TBC3 707 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 KXD1Q9BQD3 176 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 SYT15Q9BQS2 421 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
HDAC4-203ENST00000445704 MAN1B1Q9UKM7 699 aa20.12■□□□□ 0.81
HDAC4-203ENST00000445704 MYBPHLA2RUH7 354 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 MICAL2O94851 1124 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 TRIM49P0CI25 452 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 TRIM49CP0CI26 452 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 RPL13P26373 211 aaKnown RBP20.11■□□□□ 0.81
HDAC4-203ENST00000445704 PCSK1P29120 753 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 ATICP31939 592 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 PMS1P54277 932 aaKnown RBP20.11■□□□□ 0.81
HDAC4-203ENST00000445704 PSMC1P62191 440 aaKnown RBP20.11■□□□□ 0.81
HDAC4-203ENST00000445704 TNNC1P63316 161 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 TEAD2Q15562 447 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 NFE2Q16621 373 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-203ENST00000445704 MTSS1LQ765P7 747 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 SV2AQ7L0J3 742 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 ADSSL1Q8N142 457 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 LEMD2Q8NC56 503 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 STKLD1Q8NE28 680 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 GPR152Q8TDT2 470 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 GIPC2Q8TF65 315 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 SYAP1Q96A49 352 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms