RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 RECQL4O94761 1208 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 NKX3-2P78367 333 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 HIC1Q14526 733 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 PPP1R15BQ5SWA1 713 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 AADACL2Q6P093 401 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 DENND1BQ6P3S1 775 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 CCDC137Q6PK04 289 aaKnown RBP16.6■□□□□ 0.25
SNX13-204ENST00000444712 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 JAMLQ86YT9 394 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 WDTC1Q8N5D0 677 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 FNIP1Q8TF40 1166 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 C18orf8Q96DM3 657 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
SNX13-204ENST00000444712 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 LRRC19Q9H756 370 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 FEZ2Q9UHY8 353 aaPredicted RBP16.6■□□□□ 0.25
SNX13-204ENST00000444712 NR2E1Q9Y466 385 aa16.6■□□□□ 0.25
SNX13-204ENST00000444712 PNPLA4P41247 253 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 MTMR3Q13615 1198 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 ZNF268Q14587 947 aaPredicted RBP16.59■□□□□ 0.25
SNX13-204ENST00000444712 GNASQ5JWF2 1037 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 CPNE8Q86YQ8 564 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
SNX13-204ENST00000444712 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
SNX13-204ENST00000444712 GRK7Q8WTQ7 553 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 HEXIM2Q96MH2 286 aaKnown RBP16.59■□□□□ 0.25
SNX13-204ENST00000444712 MCEEQ96PE7 176 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 CELF4Q9BZC1 486 aaKnown RBP16.59■□□□□ 0.25
SNX13-204ENST00000444712 PLEKHA4Q9H4M7 779 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 SYNCQ9H7C4 482 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 SCN1AP35498 2009 aa16.59■□□□□ 0.25
SNX13-204ENST00000444712 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 MICAL2O94851 1124 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 RARBP10826 455 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 CTGFP29279 349 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 COILP38432 576 aaPredicted RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 HSPA9P38646 679 aaKnown RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 GUCY2FP51841 1108 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 NDST1P52848 882 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 IRX5P78411 483 aaPredicted RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 CFAP58Q5T655 872 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 DUPD1Q68J44 220 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 SYDE1Q6ZW31 735 aaPredicted RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 CCDC50Q8IVM0 306 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 CCDC105Q8IYK2 499 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 TRPV1Q8NER1 839 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 SLCO2A1Q92959 643 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 ST7Q9NRC1 585 aa16.58■□□□□ 0.25
SNX13-204ENST00000444712 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.58■□□□□ 0.25
SNX13-204ENST00000444712 M0QYV0 167 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 O00370 1275 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 SEPT4O43236 478 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 DAPK3O43293 454 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 KCNE1P15382 129 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 CYP3A5P20815 502 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
SNX13-204ENST00000444712 GABRB2P47870 512 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 COPS2P61201 443 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 MRPS6P82932 125 aaKnown RBP16.58■□□□□ 0.24
SNX13-204ENST00000444712 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.24
SNX13-204ENST00000444712 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 UNC93AQ86WB7 457 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 RCOR2Q8IZ40 523 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 TRIB2Q92519 343 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 TWNKQ96RR1 684 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 GTF2IRD1Q9UHL9 959 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 TRPV2Q9Y5S1 764 aa16.58■□□□□ 0.24
SNX13-204ENST00000444712 RARAP10276 462 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 KRT3P12035 628 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 ECHS1P30084 290 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 PTGIRP43119 386 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 SNX16P57768 344 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
SNX13-204ENST00000444712 RPL7AP62424 266 aaKnown RBP16.57■□□□□ 0.24
SNX13-204ENST00000444712 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
SNX13-204ENST00000444712 ACAP1Q15027 740 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 TERF2Q15554 542 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 ODF2Q5BJF6 829 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 LCLAT1Q6UWP7 414 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 HACE1Q8IYU2 909 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 TMEM40Q8WWA1 233 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 ZMAT2Q96NC0 199 aaKnown RBP16.57■□□□□ 0.24
SNX13-204ENST00000444712 GOLGA8KD6RF30 607 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 CAPN15O75808 1086 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 ECEL1O95672 775 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 FAM153BP0C7A2 387 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 SETSIPP0DME0 302 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 GGCXP38435 758 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 FLT3LGP49771 235 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 FAM153CQ494X1 144 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 C9orf57Q5W0N0 161 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 PAXIP1Q6ZW49 1069 aaPredicted RBP16.57■□□□□ 0.24
SNX13-204ENST00000444712 POLNQ7Z5Q5 900 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms