RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 WDR6Q9NNW5 1121 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 DACH1Q9UI36 760 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 RWDD2AQ9UIY3 292 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 CLUHO75153 1309 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 C19orf67A6NJJ6 358 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 DLL1O00548 723 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 GABRDO14764 452 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 TACC1O75410 805 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 GNA14O95837 355 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 FAM163BP0C2L3 166 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 WARSP23381 471 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 SP100P23497 879 aaPredicted RBP18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 ACAT1P24752 427 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 MXI1P50539 228 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 PLD1Q13393 1074 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 OSTM1Q86WC4 334 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 ELMOD1Q8N336 334 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 ATAD1Q8NBU5 361 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 KBTBD7Q8WVZ9 684 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 HSFX1Q9UBD0 423 aa18.69■□□□□ 0.58
SMARCAL1-209ENST00000444508 LOC730098B7Z3J9 87 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 TNFRSF10AO00220 468 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 ASS1P00966 412 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 GNL1P36915 607 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 NLRP12P59046 1061 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 DUSP4Q13115 394 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 NFE2Q16621 373 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 INTS6LQ5JSJ4 861 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 OTOP3Q7RTS5 596 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 GRASPQ7Z6J2 395 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 TDRD5Q8NAT2 981 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 TAS1R2Q8TE23 839 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 ACSF2Q96CM8 615 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 MRPL45Q9BRJ2 306 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 SRRTQ9BXP5 876 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 USTQ9Y2C2 406 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 YIPF1Q9Y548 306 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 DENND4AQ7Z401 1863 aa18.68■□□□□ 0.58
SMARCAL1-209ENST00000444508 VNN2O95498 520 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 ALDH1A3P47895 512 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 TUFMP49411 452 aaKnown RBP18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 TWF1Q12792 350 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 IQCEQ6IPM2 695 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SCARA5Q6ZMJ2 495 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 LRRTM3Q86VH5 581 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SPPL2BQ8TCT7 592 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SLC35C1Q96A29 364 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 ZNF512Q96ME7 567 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SEPT5Q99719 369 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SYT15Q9BQS2 421 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SMYD3Q9H7B4 428 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 ABI2Q9NYB9 513 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 CDH9Q9ULB4 789 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 SLC27A5Q9Y2P5 690 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 PCDHB5Q9Y5E4 795 aa18.67■□□□□ 0.58
SMARCAL1-209ENST00000444508 PDGFRBP09619 1106 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 CCDC192P0DO97 292 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 PTPN2P17706 415 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 FSHRP23945 695 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 EPHB3P54753 998 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 MAPRE1Q15691 268 aaKnown RBP18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 TPD52L1Q16890 204 aaPredicted RBP18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 PABPC1LQ4VXU2 614 aaKnown RBP18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 CCDC183Q5T5S1 534 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 FBXL13Q8NEE6 735 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 PI4K2AQ9BTU6 479 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 CRISPLD1Q9H336 500 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 CD320Q9NPF0 282 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 GTF3C4Q9UKN8 822 aa18.66■□□□□ 0.58
SMARCAL1-209ENST00000444508 A8MXQ7 604 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 C2CD4DB7Z1M9 353 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 HCRTO43612 131 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 LMO2P25791 158 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 ERCC5P28715 1186 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 GBP2P32456 591 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 CDR1P51861 262 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 PSMC1P62191 440 aaKnown RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 NOP14P78316 857 aaKnown RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 MGAT5BQ3V5L5 792 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 WDR44Q5JSH3 913 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 RBM43Q6ZSC3 357 aaKnown RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 GET4Q7L5D6 327 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 PLCD3Q8N3E9 789 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 ELMO3Q96BJ8 720 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 CORO1BQ9BR76 489 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 TMLHEQ9NVH6 421 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 RAB20Q9NX57 234 aa18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
SMARCAL1-209ENST00000444508 N4BP1O75113 896 aaKnown RBP18.64■□□□□ 0.57
SMARCAL1-209ENST00000444508 HAPLN1P10915 354 aaPredicted RBP18.64■□□□□ 0.57
SMARCAL1-209ENST00000444508 RAP1GAPP47736 663 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms