RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 ANKRD40Q6AI12 368 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 DPH6Q7L8W6 267 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 TMC8Q8IU68 726 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 NPAS3Q8IXF0 933 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 SPATA18Q8TC71 538 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 ING5Q8WYH8 240 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 ASIC4Q96FT7 647 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 ACBD6Q9BR61 282 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 CORO1BQ9BR76 489 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 MRPL45Q9BRJ2 306 aaKnown RBP23.43■■□□□ 1.34
TRAF4-205ENST00000444415 VRTNQ9H8Y1 702 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 CDH7Q9ULB5 785 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 SORCS3Q9UPU3 1222 aa23.43■■□□□ 1.34
TRAF4-205ENST00000444415 ZNF318Q5VUA4 2279 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 ZDBF2Q9HCK1 2354 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 CEBPBP17676 345 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 PTPN2P17706 415 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 EPHA5P54756 1037 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 PPP3CAQ08209 521 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 MORC3Q14149 939 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 INTS6LQ5JSJ4 861 aaKnown RBP23.42■■□□□ 1.34
TRAF4-205ENST00000444415 SV2AQ7L0J3 742 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 FAM186BQ8IYM0 893 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 HSFX1Q9UBD0 423 aa23.42■■□□□ 1.34
TRAF4-205ENST00000444415 HOOK1Q9UJC3 728 aaKnown RBP23.42■■□□□ 1.34
TRAF4-205ENST00000444415 OBSL1O75147 1896 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 DENND4CQ5VZ89 1909 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 ANHXE9PGG2 379 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 ATP2C2O75185 946 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 VAMP7P51809 220 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 HTR4Q13639 388 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 NCOA4Q13772 614 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 RPP25Q9BUL9 199 aaKnown RBP23.41■■□□□ 1.34
TRAF4-205ENST00000444415 GREB1Q4ZG55 1949 aa23.41■■□□□ 1.34
TRAF4-205ENST00000444415 MYBPHLA2RUH7 354 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 PPP1R3GB7ZBB8 358 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 IKBKBO14920 756 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 LRRN2O75325 713 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 WARSP23381 471 aaKnown RBP23.4■■□□□ 1.34
TRAF4-205ENST00000444415 PSMC2P35998 433 aaKnown RBP23.4■■□□□ 1.34
TRAF4-205ENST00000444415 AP3M2P53677 418 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 BIRC3Q13489 604 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 WDR72Q3MJ13 1102 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 TMEM31Q5JXX7 168 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 TRIM67Q6ZTA4 783 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 FGF14Q92915 247 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 LPIN3Q9BQK8 851 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 ZNF334Q9HCZ1 680 aaPredicted RBP23.4■■□□□ 1.34
TRAF4-205ENST00000444415 CRTAC1Q9NQ79 661 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 ABI2Q9NYB9 513 aaPredicted RBP23.4■■□□□ 1.34
TRAF4-205ENST00000444415 GTF3C4Q9UKN8 822 aa23.4■■□□□ 1.34
TRAF4-205ENST00000444415 BIN1O00499 593 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 NARSO43776 548 aaKnown RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 HAPLN1P10915 354 aaPredicted RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 RPL13P26373 211 aaKnown RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 ATICP31939 592 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 LHX1P48742 406 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 GPR15P49685 360 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 PSMC1P62191 440 aaKnown RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 MTMR3Q13615 1198 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 FAM171BQ6P995 826 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 PARM1Q6UWI2 310 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 INTS8Q75QN2 995 aaKnown RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 SPPL2BQ8TCT7 592 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 SEPT5Q99719 369 aaPredicted RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 MKNK1Q9BUB5 465 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 SDCBP2Q9H190 292 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 SMYD3Q9H7B4 428 aa23.39■■□□□ 1.34
TRAF4-205ENST00000444415 MRPS23Q9Y3D9 190 aaKnown RBP23.39■■□□□ 1.34
TRAF4-205ENST00000444415 TACC1O75410 805 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 GJA1P17302 382 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 GCLMP48507 274 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 MYL7Q01449 175 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 TSPY1Q01534 308 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 ENPEPQ07075 957 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 SIGLEC14Q08ET2 396 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 SMARCB1Q12824 385 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 TRPC3Q13507 836 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 MGAT5BQ3V5L5 792 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 HFE2Q6ZVN8 426 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 DCP1BQ8IZD4 617 aaKnown RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 C2orf15Q8WU43 125 aaKnown RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 PSMG2Q969U7 264 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 SYAP1Q96A49 352 aaPredicted RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 ZNF512Q96ME7 567 aaPredicted RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 MMS19Q96T76 1030 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 DUSP9Q99956 384 aaKnown RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 IGSF9Q9P2J2 1179 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 NXF1Q9UBU9 619 aaKnown RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 R3HCC1Q9Y3T6 440 aaKnown RBP23.38■■□□□ 1.33
TRAF4-205ENST00000444415 NUMBLQ9Y6R0 609 aa23.38■■□□□ 1.33
TRAF4-205ENST00000444415 PHACTR2O75167 634 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 CCNE1P24864 410 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 CAMK4Q16566 473 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 ZNF699Q32M78 642 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 SPOPLQ6IQ16 392 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 STKLD1Q8NE28 680 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 SHKBP1Q8TBC3 707 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 TAS1R2Q8TE23 839 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 SYT15Q9BQS2 421 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms