RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ZNF321PQ8N8H1 164 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 KRT23Q9C075 422 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 MVB12BQ9H7P6 319 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 FARSBQ9NSD9 589 aaKnown RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 ORC3Q9UBD5 711 aaPredicted RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 SALL4Q9UJQ4 1053 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 A0A1W2PPL8 197 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 GREM1O60565 184 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 DHRS4L1P0CG22 281 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 COL9A1P20849 921 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ANTXR2P58335 489 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 NOP14P78316 857 aaKnown RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 GRSF1Q12849 480 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBA52-202ENST00000442744 ORC1Q13415 861 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ZNF267Q14586 743 aaPredicted RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBA52-202ENST00000442744 PKN3Q6P5Z2 889 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 CHST15Q7LFX5 561 aaPredicted RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 DNAJB8Q8NHS0 232 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 SAAL1Q96ER3 474 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ZNF274Q96GC6 653 aaPredicted RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 RHBGQ9H310 441 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ARFGAP3Q9NP61 516 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 ACTR3BQ9P1U1 418 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 SATB2Q9UPW6 733 aa11.31□□□□□ -0.6
UBA52-202ENST00000442744 APOBEC2Q9Y235 224 aaKnown RBP11.31□□□□□ -0.6
UBA52-202ENST00000442744 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 PLEKHG2Q9H7P9 1386 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 DCCP43146 1447 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 A0A0G2JS52 829 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GOLGA8JA6NMD2 632 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GOLGA8TH3BQL2 631 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 HAT1O14929 419 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBA52-202ENST00000442744 KRT14P02533 472 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 IDO1P14902 403 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 DSG3P32926 999 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GTF2H3Q13889 308 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 LASP1Q14847 261 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 EFTUD2Q15029 972 aaKnown RBP eCLIP11.3□□□□□ -0.63e-7■■■■■ 35.6
UBA52-202ENST00000442744 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 ODF2Q5BJF6 829 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 LRIG3Q6UXM1 1119 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 FAM156AQ8NDB6 213 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 ZSWIM2Q8NEG5 633 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 NTN4Q9HB63 628 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GRHPRQ9UBQ7 328 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 KLHL2O95198 593 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 PSAPP07602 524 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 BCRP11274 1271 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 VEGFAP15692 232 aaPredicted RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 SLC8A3P57103 927 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 STIM1Q13586 685 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.63e-9■□□□□ 8.4
UBA52-202ENST00000442744 ZRSR1Q15695 479 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 OLFML2BQ68BL8 750 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 IYDQ6PHW0 289 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 ZNF574Q6ZN55 896 aaPredicted RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 FBXO18Q8NFZ0 1043 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 IFI44Q8TCB0 444 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 CLIC6Q96NY7 704 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 GAS2L1Q99501 681 aaPredicted RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 DDX25Q9UHL0 483 aaKnown RBP11.3□□□□□ -0.6
UBA52-202ENST00000442744 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 ANGPTL2Q9UKU9 493 aa11.3□□□□□ -0.6
UBA52-202ENST00000442744 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.29□□□□□ -0.6
UBA52-202ENST00000442744 PSMD9O00233 223 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 PROM1O43490 865 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 A1BGP04217 495 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
UBA52-202ENST00000442744 GSDMDP57764 484 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 ARHGAP8P85298 464 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 PNOCQ13519 176 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 COTL1Q14019 142 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 XKR9Q5GH70 373 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 PDPK2PQ6A1A2 396 aa11.29□□□□□ -0.6
UBA52-202ENST00000442744 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms