RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PGLYRP2Q96PD5 576 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 MRPL45Q9BRJ2 306 aaKnown RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 CYP4F11Q9HBI6 524 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
USP1-203ENST00000442679 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 FAM50BQ9Y247 325 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 SCN1AP35498 2009 aa13.2□□□□□ -0.3
USP1-203ENST00000442679 PMM2O15305 246 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 HCRTO43612 131 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 N4BP1O75113 896 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 C8AP07357 584 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 LMO2P25791 158 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 CETN1Q12798 172 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 LRRTM3Q86VH5 581 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 TCEAL8Q8IYN2 117 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 CMASQ8NFW8 434 aaPredicted RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 NAT10Q9H0A0 1025 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 ZDHHC7Q9NXF8 308 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
USP1-203ENST00000442679 USP15Q9Y4E8 981 aaPredicted RBP13.19□□□□□ -0.3
USP1-203ENST00000442679 SYCE3A1L190 88 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 MTMR11A4FU01 709 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 A8MXQ7 604 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 P4HA2O15460 535 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 ATP2C2O75185 946 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 VNN2O95498 520 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 HNRNPA1P09651 372 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP1-203ENST00000442679 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 BMP1P13497 986 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 ASPAP45381 313 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 CDR1P51861 262 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 DUSP4Q13115 394 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 ANO6Q4KMQ2 910 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
USP1-203ENST00000442679 ATAT1Q5SQI0 421 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 ATAD1Q8NBU5 361 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 ZNF707Q96C28 371 aaPredicted RBP13.18□□□□□ -0.3
USP1-203ENST00000442679 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 NIF3L1Q9GZT8 377 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 PIDD1Q9HB75 910 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 TMLHEQ9NVH6 421 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 CDH9Q9ULB4 789 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
USP1-203ENST00000442679 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 CCL16O15467 120 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 XYLBO75191 536 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 PAPLNO95428 1278 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 LRG1P02750 347 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 IL9P15248 144 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 HOXA9P31269 272 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 MTHFRP42898 656 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
USP1-203ENST00000442679 MYL5Q02045 173 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 LRMPQ12912 555 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
USP1-203ENST00000442679 NFE2Q16621 373 aaPredicted RBP13.17□□□□□ -0.3
USP1-203ENST00000442679 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
USP1-203ENST00000442679 SUSD6Q92537 303 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
USP1-203ENST00000442679 TATDN2Q93075 761 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 CYP3A43Q9HB55 503 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 NME7Q9Y5B8 376 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
USP1-203ENST00000442679 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
USP1-203ENST00000442679 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
USP1-203ENST00000442679 EEF1GP26641 437 aaKnown RBP13.16□□□□□ -0.3
USP1-203ENST00000442679 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
USP1-203ENST00000442679 TWF1Q12792 350 aa13.16□□□□□ -0.3
USP1-203ENST00000442679 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms