RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 ITGA11Q9UKX5 1188 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 EP300Q09472 2414 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 EXTL3O43909 919 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 ITGB3P05106 788 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 HSP90AA1P07900 732 aaKnown RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 KRT19P08727 400 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 CCR3P51677 355 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 CYP4F8P98187 520 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 AMPD3Q01432 767 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 FCHO2Q0JRZ9 810 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 NFE2Q16621 373 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 STXBP5Q5T5C0 1151 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 GAREM2Q75VX8 874 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 MAML2Q8IZL2 1156 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 STRA6Q9BX79 667 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 IKZF4Q9H2S9 585 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 CUEDC2Q9H467 287 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 PRMT8Q9NR22 394 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 KIF26AQ9ULI4 1882 aaPredicted RBP12.68□□□□□ -0.38
TTC28-203ENST00000442232 ZNF292O60281 2723 aa12.68□□□□□ -0.38
TTC28-203ENST00000442232 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 GOLGA8IPA6NC78 632 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 GOLGA8JA6NMD2 632 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 SPTLC2O15270 562 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 TNNC2P02585 160 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 CCNE1P24864 410 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.38
TTC28-203ENST00000442232 AVPR1AP37288 418 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 CASP5P51878 434 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 MLLT6P55198 1093 aaPredicted RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 ASIC1P78348 528 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 RBP5P82980 135 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 KCNA1Q09470 495 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 MTAPQ13126 283 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 SURF1Q15526 300 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 TMEM86AQ8N2M4 240 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 BPIFB1Q8TDL5 484 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 CBWD1Q9BRT8 395 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 PCIF1Q9H4Z3 704 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 LMAN1LQ9HAT1 526 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
TTC28-203ENST00000442232 OBSL1O75147 1896 aa12.67□□□□□ -0.38
TTC28-203ENST00000442232 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 CSH1P0DML2 217 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 CSH2P0DML3 217 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 ATF6P18850 670 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 PCSK1P29120 753 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 CDR1P51861 262 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 ERMP1Q7Z2K6 904 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 RALGPS2Q86X27 583 aaPredicted RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 ADGRF2Q8IZF7 708 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 C1orf127Q8N9H9 656 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 MTMR12Q9C0I1 747 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 MAGEF1Q9HAY2 307 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 DDX43Q9NXZ2 648 aaKnown RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 GMEB2Q9UKD1 530 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 MAGED2Q9UNF1 606 aaPredicted RBP12.66□□□□□ -0.38
TTC28-203ENST00000442232 WDR87Q6ZQQ6 2873 aa12.66□□□□□ -0.38
TTC28-203ENST00000442232 NCANO14594 1321 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 A0A087X0B3 334 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 CUTAO60888 179 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 PPP6R2O75170 966 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 PRAMEF12O95522 483 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms