RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TMEM74BQ9NUR3 256 aa6.03□□□□□ -1.44
PFDN4-202ENST00000441080 XPR1Q9UBH6 696 aa6.03□□□□□ -1.44
PFDN4-202ENST00000441080 MYRFQ9Y2G1 1151 aa6.03□□□□□ -1.44
PFDN4-202ENST00000441080 RAD54BQ9Y620 910 aa6.03□□□□□ -1.44
PFDN4-202ENST00000441080 A0A087WWL8 130 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 CENPVL1A0A0U1RR11 272 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 TRIM43BA6NCK2 446 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 FOXN3O00409 490 aaPredicted RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SOAT2O75908 522 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SPDEFO95238 335 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 VIPR2P41587 438 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 PIK3CBP42338 1070 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 TOB1P50616 345 aaPredicted RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 VAV2P52735 878 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 RPS7P62081 194 aaKnown RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 IFIT5Q13325 482 aaKnown RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 HDAC1Q13547 482 aaPredicted RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 DYRK1AQ13627 763 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 CD300EQ496F6 205 aaPredicted RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 LONRF3Q496Y0 759 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 KCNV1Q6PIU1 500 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 RHOUQ7L0Q8 258 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SESTD1Q86VW0 696 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 ADGRG5Q8IZF4 528 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 FBXO41Q8TF61 875 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SNX19Q92543 992 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 TRIM43Q96BQ3 446 aaPredicted RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SLC46A1Q96NT5 459 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 NAA15Q9BXJ9 866 aaKnown RBP6.02□□□□□ -1.45
PFDN4-202ENST00000441080 SMOC2Q9H3U7 446 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
PFDN4-202ENST00000441080 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 MATN3O15232 486 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ATXN1LP0C7T5 689 aaKnown RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ITGALP20701 1170 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 NPTX2P47972 431 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 GCLCP48506 637 aaPredicted RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 RPS16P62249 146 aaKnown RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 TP53BP2Q13625 1128 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 BOP1Q14137 746 aaKnown RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 IQCB1Q15051 598 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 SYCP2LQ5T4T6 812 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 FNDC7Q5VTL7 733 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 LAYNQ6UX15 382 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 TMPRSS9Q7Z410 1059 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ARHGEF19Q8IW93 802 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 PROKR1Q8TCW9 393 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 PARD3BQ8TEW8 1205 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 TBCBQ99426 244 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ZNF747Q9BV97 191 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 UNKLQ9H9P5 680 aaKnown RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 PNPLA8Q9NP80 782 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 COL20A1Q9P218 1284 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ANKFY1Q9P2R3 1169 aa6.01□□□□□ -1.45
PFDN4-202ENST00000441080 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.01□□□□□ -1.45
PFDN4-202ENST00000441080 MBD3L4A6NDZ8 208 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 MBD3L3A6NE82 208 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 TMEM233B4DJY2 109 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 NPIPB8E9PQR5 432 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 DCLK1O15075 740 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 KPNA5O15131 536 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 ZNF202O95125 648 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 XRCC6P12956 609 aaKnown RBP eCLIP6□□□□□ -1.45
PFDN4-202ENST00000441080 PRIM2P49643 509 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 NDUFV1P49821 464 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 WNT3P56703 355 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 PUM1Q14671 1186 aaKnown RBP eCLIP6□□□□□ -1.452e-6■■□□□ 13.4
PFDN4-202ENST00000441080 HLXQ14774 488 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 LONRF1Q17RB8 773 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 ZXDCQ2QGD7 858 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 LY6G5CQ5SRR4 150 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 DCAF12L1Q5VU92 463 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 SP5Q6BEB4 398 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 MICALCLQ6ZW33 695 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 MRGPREQ86SM8 312 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 MICU3Q86XE3 530 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 OR56A3Q8NH54 315 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 SVIPQ8NHG7 77 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 MSLNLQ96KJ4 702 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 MLST8Q9BVC4 326 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 UNKQ9C0B0 810 aaKnown RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 MS4A7Q9GZW8 240 aaPredicted RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 MMRN2Q9H8L6 949 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 A1CFQ9NQ94 594 aaKnown RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 CHST12Q9NRB3 414 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 INTS13Q9NVM9 706 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 TESQ9UGI8 421 aaKnown RBP6□□□□□ -1.45
PFDN4-202ENST00000441080 PHTF1Q9UMS5 762 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 HS3ST4Q9Y661 456 aa6□□□□□ -1.45
PFDN4-202ENST00000441080 F5H697 171 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 PYCARD-AS1I3L0S3 204 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 IL18RAPO95256 599 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 IFIT2P09913 472 aaKnown RBP5.99□□□□□ -1.45
PFDN4-202ENST00000441080 CYP2C9P11712 490 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 MAKP20794 623 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 KLRC1P26715 233 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 PXNP49023 591 aaPredicted RBP5.99□□□□□ -1.45
PFDN4-202ENST00000441080 ZNF134P52741 427 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 AK2P54819 239 aa5.99□□□□□ -1.45
PFDN4-202ENST00000441080 LOXL3P58215 753 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms