RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BFSP1Q12934 665 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 PPP2R5CQ13362 524 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 PLEKHG4Q58EX7 1191 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CCDC89Q8N998 374 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 MCUR1Q96AQ8 359 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 SFI1A8K8P3 1242 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 A8MXQ7 604 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 ZBTB39O15060 712 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 TYROBPO43914 113 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 POLR2MP0CAP2 368 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 KRT15P19012 456 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CYP2J2P51589 502 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 MCL1Q07820 350 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 COG2Q14746 738 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 ANKS1BQ7Z6G8 1248 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 KBTBD2Q8IY47 623 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 ZNF280CQ8ND82 737 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 DTX3LQ8TDB6 740 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
LTBR-203ENST00000441074 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 IL1RAPL1Q9NZN1 696 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 NOCTQ9UK39 431 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 LOXHD1Q8IVV2 1947 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 IGLV3-22A0A075B6J6 115 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 USP2O75604 605 aaPredicted RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 SGPL1O95470 568 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 FGFR1P11362 822 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 VPS41P49754 854 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 DCAF15Q66K64 600 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 C4orf33Q8N1A6 199 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 ZNF653Q96CK0 615 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 HAPLN3Q96S86 360 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 FIZ1Q96SL8 496 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 SSU72Q9NP77 194 aaKnown RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 ANGPTL2Q9UKU9 493 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 DNAJC6O75061 913 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 CYP1A1P04798 512 aaPredicted RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 ICAM1P05362 532 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 UBTFL6P0CB48 400 aaPredicted RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 SH3BGRP55822 239 aaPredicted RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 LSAMPQ13449 338 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 ALCAMQ13740 583 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 VGLL4Q14135 290 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 KRT72Q14CN4 511 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 RASA2Q15283 850 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 NOP9Q86U38 636 aaKnown RBP12.53□□□□□ -0.4
LTBR-203ENST00000441074 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 TRIM73Q86UV7 250 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 EPS8L1Q8TE68 723 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 TMEM174Q8WUU8 243 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 NACC1Q96RE7 527 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 CENPKQ9BS16 269 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 PPCSQ9HAB8 311 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 ZNF112Q9UJU3 913 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 TMCO1Q9UM00 188 aa12.53□□□□□ -0.4
LTBR-203ENST00000441074 POC1B-GALNT4F8VUJ3 575 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.41
LTBR-203ENST00000441074 PSMD10O75832 226 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 ARP10275 920 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 IMPDH2P12268 514 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 CETN2P41208 172 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 MAPK6Q16659 721 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 LIN52Q52LA3 116 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 RINLQ6ZS11 566 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
LTBR-203ENST00000441074 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 ARHGAP24Q8N264 748 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 STKLD1Q8NE28 680 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 RFWD2Q8NHY2 731 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms