RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LRRIQ3A6PVS8 624 aaPredicted RBP14.74□□□□□ -0.05
LTBR-202ENST00000440421 CLSTN1O94985 981 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 DLG4P78352 724 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 BIRC3Q13489 604 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 CCDC142Q17RM4 750 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 MTSS1LQ765P7 747 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 GUF1Q8N442 669 aaKnown RBP14.74□□□□□ -0.05
LTBR-202ENST00000440421 PARD3BQ8TEW8 1205 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 GIPC2Q8TF65 315 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 LPIN3Q9BQK8 851 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 ACBD6Q9BR61 282 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 PI4K2AQ9BTU6 479 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 MFSD1Q9H3U5 465 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 TRAF3IP3Q9Y228 551 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 PCDHB5Q9Y5E4 795 aa14.74□□□□□ -0.05
LTBR-202ENST00000440421 GADD45BO75293 160 aaPredicted RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 MOSPD3O75425 235 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 HAPLN1P10915 354 aaPredicted RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 SRFP11831 508 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 ATF6P18850 670 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 NR2F2P24468 414 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 LHX1P48742 406 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 TUFMP49411 452 aaKnown RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 EPHA5P54756 1037 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 VCPP55072 806 aaKnown RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 MYL6P60660 151 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 VEPH1Q14D04 833 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 TEAD2Q15562 447 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 WDR72Q3MJ13 1102 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 INTS6LQ5JSJ4 861 aaKnown RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 TDRD10Q5VZ19 366 aaKnown RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 DPH6Q7L8W6 267 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 TMC8Q8IU68 726 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 SIX5Q8N196 739 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 LEMD2Q8NC56 503 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 SPPL2BQ8TCT7 592 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 GPR152Q8TDT2 470 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 C2orf15Q8WU43 125 aaKnown RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 KBTBD7Q8WVZ9 684 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 PSMG2Q969U7 264 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 ELMO3Q96BJ8 720 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 LRRC3Q9BY71 257 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 ZNF334Q9HCZ1 680 aaPredicted RBP14.73□□□□□ -0.05
LTBR-202ENST00000440421 RMND1Q9NWS8 449 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 GDE1Q9NZC3 331 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 GTF3C4Q9UKN8 822 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 FRMD4BQ9Y2L6 1034 aa14.73□□□□□ -0.05
LTBR-202ENST00000440421 A0A1W2PRU2 124 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 GABRDO14764 452 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 ATP2C2O75185 946 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SMC2O95347 1197 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 PDGFRBP09619 1106 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 LMO2P25791 158 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 PCSK1P29120 753 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 ANP32AP39687 249 aaKnown RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 GPR15P49685 360 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 PSMC1P62191 440 aaKnown RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 TNNC1P63316 161 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 GPC5P78333 572 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SMARCB1Q12824 385 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 TAF12Q16514 161 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 NFE2Q16621 373 aaPredicted RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 FAM78AQ5JUQ0 283 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 ITIH5Q86UX2 942 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SHKBP1Q8TBC3 707 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SPATA18Q8TC71 538 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 TMEM174Q8WUU8 243 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SMARCE1Q969G3 411 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 ZSWIM3Q96MP5 696 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 TIGD1Q96MW7 591 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SYT15Q9BQS2 421 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 MRPL45Q9BRJ2 306 aaKnown RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 PLA2G2FQ9BZM2 168 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 SLITRK6Q9H5Y7 841 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 NXF1Q9UBU9 619 aaKnown RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 HOOK1Q9UJC3 728 aaKnown RBP14.72□□□□□ -0.05
LTBR-202ENST00000440421 CA14Q9ULX7 337 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 ASB3Q9Y575 518 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
LTBR-202ENST00000440421 MYBPHLA2RUH7 354 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 KINO60870 393 aaKnown RBP14.71□□□□□ -0.05
LTBR-202ENST00000440421 AKAP3O75969 853 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 MICAL2O94851 1124 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 C4BPAP04003 597 aaKnown RBP14.71□□□□□ -0.05
LTBR-202ENST00000440421 WARSP23381 471 aaKnown RBP14.71□□□□□ -0.05
LTBR-202ENST00000440421 RPL13P26373 211 aaKnown RBP14.71□□□□□ -0.05
LTBR-202ENST00000440421 GABRR2P28476 465 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 PRCPP42785 496 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 VAMP7P51809 220 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 AP3M2P53677 418 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 CLDN10P78369 228 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 ADAM9Q13443 819 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 NCOA4Q13772 614 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 IER5LQ5T953 404 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
LTBR-202ENST00000440421 SDHAF4Q5VUM1 108 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 ISM2Q6H9L7 571 aa14.71□□□□□ -0.05
LTBR-202ENST00000440421 TANGO2Q6ICL3 276 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms