RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 RAP1GAPP47736 663 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 TAP1Q03518 808 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 ACTN3Q08043 901 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-214ENST00000439122 TFDP3Q5H9I0 405 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 LRRC38Q5VT99 294 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 SPOCD1Q6ZMY3 1216 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 ANKS4BQ8N8V4 417 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 GLIS1Q8NBF1 620 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 RBM15Q96T37 977 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC8-214ENST00000439122 MMP19Q99542 508 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 PTPRHQ9HD43 1115 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 KCNK9Q9NPC2 374 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 PCDHGC3Q9UN70 934 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 B4GALT4O60513 344 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ATP2C2O75185 946 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 TXNP10599 105 aaKnown RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ARSEP51690 589 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 IGBP1P78318 339 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CYP4F22Q6NT55 531 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 HIBCHQ6NVY1 386 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 DENND1BQ6P3S1 775 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 MOB2Q70IA6 237 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 TMEM192Q8IY95 271 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CCDC13Q8IYE1 715 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CCDC197Q8NCU1 140 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 FZD8Q9H461 694 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 SMARCAD1Q9H4L7 1026 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 MINDY3Q9H8M7 445 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ADARB2Q9NS39 739 aaKnown RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 SAMD15Q9P1V8 674 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 MCM3APO60318 1980 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ASAP2O43150 1006 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ETS1P14921 441 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 PSMA2P25787 234 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CDH5P33151 784 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CDH8P55286 799 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 YWHAEP62258 255 aaKnown RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 GPS1Q13098 491 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ORC1Q13415 861 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 ZCCHC9Q8N567 271 aaKnown RBP12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CCHCR1Q8TD31 782 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 MLXIPLQ9NP71 852 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
HDAC8-214ENST00000439122 hCG_1818297A0A087WSY0 165 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CSDE1O75534 798 aaKnown RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 KRT3P12035 628 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 RFC1P35251 1148 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 MAGEA4P43358 317 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 COPS2P61201 443 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 MBTD1Q05BQ5 628 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SPRED3Q2MJR0 410 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 ANKRD20A8PQ5CZ79 823 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 ZNF667Q5HYK9 610 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 DRICH1Q6PGQ1 229 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 TMEM130Q8N3G9 435 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 ANKRD42Q8N9B4 389 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CCDC77Q9BR77 488 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CDT1Q9H211 546 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SAYSD1Q9NPB0 183 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 PDGFCQ9NRA1 345 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
HDAC8-214ENST00000439122 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 EVPLQ92817 2033 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SGK1O00141 431 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 DNM1LO00429 736 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CXCL11O14625 94 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 MED7O43513 233 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 HBP1O60381 514 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CDH16O75309 829 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 TCEA3O75764 348 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 IFNB1P01574 187 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 NFICP08651 508 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CETPP11597 493 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 BRAFP15056 766 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 CDKN2BP42772 138 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 SLC26A2P50443 739 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 DYNLT1P63172 113 aa12.79□□□□□ -0.36
HDAC8-214ENST00000439122 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms