RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 ARMCX5Q6P1M9 558 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 THSD4Q6ZMP0 1018 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 KIAA2013Q8IYS2 634 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 MAML2Q8IZL2 1156 aaPredicted RBP9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 LEMD2Q8NC56 503 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 BEST2Q8NFU1 509 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 ATRIPQ8WXE1 791 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 SMARCD2Q92925 531 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 ZSWIM3Q96MP5 696 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 ANP32EQ9BTT0 268 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 MAGEF1Q9HAY2 307 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 ODF2LQ9ULJ1 636 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 NDRG2Q9UN36 371 aaKnown RBP9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 YIPF1Q9Y548 306 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 MIA3Q5JRA6 1907 aa9.95□□□□□ -0.82
AC011228.1-201ENST00000439027 TPRP12270 2363 aaKnown RBP9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 MAN2B1O00754 1011 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 PPEF2O14830 753 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 SCP2P22307 547 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 FCARP24071 287 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 NMT1P30419 496 aaKnown RBP9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 ALDH1A3P47895 512 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 FOXK2Q01167 660 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 AMPD3Q01432 767 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 CUL4BQ13620 913 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 ZBTB6Q15916 424 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 OVOS1Q6IE37 1185 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 JADE1Q6IE81 842 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 LAPTM4BQ86VI4 370 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 GPIHBP1Q8IV16 184 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 YAF2Q8IY57 180 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 DCLK2Q8N568 766 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 SHKBP1Q8TBC3 707 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 ZSCAN18Q8TBC5 510 aaPredicted RBP9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 RUBCNQ92622 972 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 DNASE1L2Q92874 299 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 IRF7Q92985 503 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 CLDN23Q96B33 292 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 SENP8Q96LD8 212 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 ASB16Q96NS5 453 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 OXCT2Q9BYC2 517 aaPredicted RBP9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 BLZF1Q9H2G9 400 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 KBTBD4Q9NVX7 518 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 FBXO4Q9UKT5 387 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 SDK1Q7Z5N4 2213 aa9.94□□□□□ -0.82
AC011228.1-201ENST00000439027 COL4A3Q01955 1670 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 A0A0B4J269 797 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 MYMKA6NI61 221 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 HEPACAM2A8MVW5 462 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ZNF263O14978 683 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 MOSPD3O75425 235 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 SOAT2O75908 522 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 SMC2O95347 1197 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 VNN2O95498 520 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 PIGRP01833 764 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ODC1P11926 461 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 PSMC3P17980 439 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 TYMPP19971 482 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ACOT2P49753 483 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 CDR1P51861 262 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ZNF131P52739 623 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 LILRA4P59901 499 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 GPR17Q13304 367 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ZNF528Q3MIS6 628 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ZC2HC1CQ53FD0 456 aaPredicted RBP9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 SPATA1Q5VX52 437 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 CENPPQ6IPU0 288 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 TSSK4Q6SA08 328 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 VITQ6UXI7 678 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 RBM43Q6ZSC3 357 aaKnown RBP9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 CD302Q8IX05 232 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ATAD1Q8NBU5 361 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 DEPDC1BQ8WUY9 529 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 SMARCE1Q969G3 411 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 LRRC27Q9C0I9 530 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 GPR88Q9GZN0 384 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 ZNF334Q9HCZ1 680 aaPredicted RBP9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 NCDNQ9UBB6 729 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 PIAS3Q9Y6X2 628 aa9.93□□□□□ -0.82
AC011228.1-201ENST00000439027 A0A1W2PRU2 124 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 TISP43B9A030 160 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 ANKRD63C9JTQ0 380 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 BIN1O00499 593 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 SPTLC1O15269 473 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 FAM189A1O60320 539 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 MYL1P05976 194 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 NFICP08651 508 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 ABCD1P33897 745 aa9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 MLLT3P42568 568 aaPredicted RBP9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 RPS9P46781 194 aaKnown RBP9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 AARSP49588 968 aaKnown RBP eCLIP9.92□□□□□ -0.82
AC011228.1-201ENST00000439027 KPNA1P52294 538 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms