RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CNTNAP1P78357 1384 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 A0A1W2PS29 197 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 TLDC2A0PJX2 215 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 GPR39O43194 453 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 AGXTP21549 392 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 ABCG1P45844 678 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 CTXN1P60606 82 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 KAZNQ674X7 775 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 ZNF788Q6ZQV5 615 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 SPATS2Q86XZ4 545 aaKnown RBP3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 UNC5CLQ8IV45 518 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 RHOT1Q8IXI2 618 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 DCBLD1Q8N8Z6 715 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 WDR66Q8TBY9 1149 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 NRG4Q8WWG1 115 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 TMEM125Q96AQ2 219 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 TIMP4Q99727 224 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 KMT5AQ9NQR1 393 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 INTS13Q9NVM9 706 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 INTUQ9ULD6 942 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 ENTPD2Q9Y5L3 495 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 ERICH3Q5RHP9 1530 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 PLCH2O75038 1416 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 MUC3AQ02505 3323 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 UGGT1Q9NYU2 1555 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 WASHC2AQ641Q2 1341 aa3.93□□□□□ -1.78
HMGB1P18-201ENST00000438801 MARF1Q9Y4F3 1742 aaKnown RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 COL3A1P02461 1466 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 ZNF292O60281 2723 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PRAMEF33A0A0G2JMD5 474 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 CCDC151A5D8V7 595 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 DNAJC9-AS1A6NH13 148 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 MPPED1O15442 326 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PROM1O43490 865 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PRAMEF10O60809 474 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 KRT38O76015 456 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 KCNA2P16389 499 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 WT1P19544 449 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 HSD3B2P26439 372 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 SLC6A4P31645 630 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 GRIA3P42263 894 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 MAPK10P53779 464 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PROK1P58294 105 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 ERVK-21P61565 698 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 RPS7P62081 194 aaKnown RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 MAP2K1Q02750 393 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 FPGSQ05932 587 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 EPHA10Q5JZY3 1008 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 BRINP3Q76B58 766 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 CLNKQ7Z7G1 428 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PEG10Q86TG7 708 aaKnown RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 SH2D3CQ8N5H7 860 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 PPM1NQ8N819 430 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 COG1Q8WTW3 980 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 TFAP2BQ92481 460 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 FBXL20Q96IG2 436 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 TLR10Q9BXR5 811 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 CPNE5Q9HCH3 593 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 ZNF277Q9NRM2 450 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 VSX1Q9NZR4 365 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 RNF7Q9UBF6 113 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 SAMD9LQ8IVG5 1584 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 REREQ9P2R6 1566 aa3.92□□□□□ -1.78
HMGB1P18-201ENST00000438801 CGB1A6NKQ9 187 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 K7ESF4 209 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 AGFG2O95081 481 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 ERBB2P04626 1255 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 MTHFD1P11586 935 aaKnown RBP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 GPD1P21695 349 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 GATA3P23771 443 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 WASP42768 502 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 SRSF4Q08170 494 aaKnown RBP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 ZNF844Q08AG5 666 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 CD300EQ496F6 205 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 UTP14CQ5TAP6 766 aaKnown RBP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 TSHZ1Q6ZSZ6 1077 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 KRT26Q7Z3Y9 468 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 RSPH3Q86UC2 560 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 AMOTL1Q8IY63 956 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 SLC30A5Q8TAD4 765 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 SMG7Q92540 1137 aaKnown RBP3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 RAB24Q969Q5 203 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 SARAFQ96BY9 339 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 TMX3Q96JJ7 454 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 SLC29A3Q9BZD2 475 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 TDP1Q9NUW8 608 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 CTTNBP2NLQ9P2B4 639 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 CDYLQ9Y232 598 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 NEU2Q9Y3R4 380 aa3.91□□□□□ -1.78
HMGB1P18-201ENST00000438801 PIK3C2AO00443 1686 aa3.9□□□□□ -1.78
HMGB1P18-201ENST00000438801 SCAPERQ9BY12 1400 aa3.9□□□□□ -1.78
HMGB1P18-201ENST00000438801 GRM6O15303 877 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 SBK3P0C264 359 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 CNGA1P29973 690 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 TARDBPQ13148 414 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 KLF1Q13351 362 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 DYRK1AQ13627 763 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 PTPRRQ15256 657 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms