RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 TCP11X2Q5H9J9 407 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 LIN9Q5TKA1 542 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 SMRP1Q8NCR6 262 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 OR6B3Q8NGW1 331 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 ZNF461Q8TAF7 563 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 BCO2Q9BYV7 579 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 PLEKHA4Q9H4M7 779 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
SNRPB-202ENST00000438552 C5orf42Q9H799 3197 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 MTMR11A4FU01 709 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 PMM2O15305 246 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ATP2C2O75185 946 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 C1RP00736 705 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 PDGFRBP09619 1106 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 WEE2P0C1S8 567 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ATF2P15336 505 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 EEF1GP26641 437 aaKnown RBP17.27■□□□□ 0.36
SNRPB-202ENST00000438552 PCSK1P29120 753 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ZNF165P49910 485 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 KCNQ1P51787 676 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 LRMPQ12912 555 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 GPR17Q13304 367 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 LEXMQ3ZCV2 418 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 WDR44Q5JSH3 913 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 INTS6LQ5JSJ4 861 aaKnown RBP17.27■□□□□ 0.36
SNRPB-202ENST00000438552 MIIPQ5JXC2 388 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TPGS2Q68CL5 300 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ELMSAN1Q6PJG2 1045 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TMC5Q6UXY8 1006 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 LRRTM3Q86VH5 581 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 DHX40Q8IX18 779 aaKnown RBP17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TTC9BQ8N6N2 239 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TATDN2Q93075 761 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 PKMYT1Q99640 499 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ARID3AQ99856 593 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 ACBD6Q9BR61 282 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 DPEP3Q9H4B8 488 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 TAB2Q9NYJ8 693 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 GCNT4Q9P109 453 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 HMGXB4Q9UGU5 601 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 DPP7Q9UHL4 492 aa17.27■□□□□ 0.36
SNRPB-202ENST00000438552 GRXCR2A6NFK2 248 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 A8MXQ7 604 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 PRRG1O14668 218 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 P4HA2O15460 535 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 ZMYND10O75800 440 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 HOXB8P17481 243 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 CD58P19256 250 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 ELF1P32519 619 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 GNL1P36915 607 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 ORC1Q13415 861 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 PPM1LQ5SGD2 360 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 DCP1BQ8IZD4 617 aaKnown RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 ATAD1Q8NBU5 361 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 LMO3Q8TAP4 145 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 LPIN3Q9BQK8 851 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 INTS2Q9H0H0 1204 aaKnown RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 S1PR5Q9H228 398 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 HSD3B7Q9H2F3 369 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 CDH9Q9ULB4 789 aa17.26■□□□□ 0.35
SNRPB-202ENST00000438552 USP15Q9Y4E8 981 aaPredicted RBP17.26■□□□□ 0.35
SNRPB-202ENST00000438552 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
SNRPB-202ENST00000438552 MBTPS2O43462 519 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 NDST1P52848 882 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 CETN1Q12798 172 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 KRT31Q15323 416 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 PTCRAQ6ISU1 281 aaPredicted RBP17.25■□□□□ 0.35
SNRPB-202ENST00000438552 CCDC149Q6ZUS6 474 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.359e-7■□□□□ 8.9
SNRPB-202ENST00000438552 TCEAL8Q8IYN2 117 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
SNRPB-202ENST00000438552 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 ZDHHC7Q9NXF8 308 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 GTF3C4Q9UKN8 822 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 YIPF1Q9Y548 306 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 INSL5Q9Y5Q6 135 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
SNRPB-202ENST00000438552 TCF20Q9UGU0 1960 aaKnown RBP17.24■□□□□ 0.35
SNRPB-202ENST00000438552 MYBPHLA2RUH7 354 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 CCL16O15467 120 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 SOAT2O75908 522 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 FAM163BP0C2L3 166 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms