RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ELOVL4Q9GZR5 314 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.29■□□□□ 0.2
SGCE-205ENST00000437425 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.29■□□□□ 0.2
SGCE-205ENST00000437425 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 HES2Q9Y543 173 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 CHRNA1P02708 482 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 ITGA4P13612 1032 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 AKAP5P24588 427 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 CETN2P41208 172 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 NDST1P52848 882 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 ACLYP53396 1101 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 CCNI2Q6ZMN8 369 aaPredicted RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 RHOT1Q8IXI2 618 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
SGCE-205ENST00000437425 FAM105AQ9NUU6 356 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 OGFRQ9NZT2 677 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
SGCE-205ENST00000437425 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 TMEM191CA6NGB0 347 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 O00370 1275 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 ZNF623O75123 536 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 CFHP08603 1231 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
SGCE-205ENST00000437425 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
SGCE-205ENST00000437425 THPOP40225 353 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 GABRB2P47870 512 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 LRRC38Q5VT99 294 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 DCAF12L1Q5VU92 463 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 DCUN1D2Q6PH85 259 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 MRPL10Q7Z7H8 261 aaKnown RBP16.28■□□□□ 0.2
SGCE-205ENST00000437425 WDTC1Q8N5D0 677 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 NIPA2Q8N8Q9 360 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 IPO4Q8TEX9 1081 aaKnown RBP16.28■□□□□ 0.2
SGCE-205ENST00000437425 ALG3Q92685 438 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 KRT12Q99456 494 aa16.28■□□□□ 0.2
SGCE-205ENST00000437425 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
SGCE-205ENST00000437425 TCRBV5S1A1TA0A578 114 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 KPNA7A9QM74 516 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 MICAL2O94851 1124 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
SGCE-205ENST00000437425 PAK2Q13177 524 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 GPS2Q13227 327 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 ACAP1Q15027 740 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 DENND1BQ6P3S1 775 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.2
SGCE-205ENST00000437425 PGBD4Q96DM1 585 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 SYNCQ9H7C4 482 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 ERVK-5Q9HDB9 667 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 SMARCAL1Q9NZC9 954 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 L1RE1Q9UN81 338 aa16.27■□□□□ 0.2
SGCE-205ENST00000437425 GRIN2DO15399 1336 aa16.27■□□□□ 0.19
SGCE-205ENST00000437425 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 HUS1O60921 280 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 CHRNA3P32297 505 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 CAP1Q01518 475 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 CUL1Q13616 776 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 DHX34Q14147 1143 aaKnown RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 PTPROQ16827 1216 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 PPP1R15BQ5SWA1 713 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 ARHGAP17Q68EM7 881 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 EMBQ6PCB8 327 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 APPL2Q8NEU8 664 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 KRT35Q92764 455 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 PPP1R10Q96QC0 940 aaKnown RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 VIPAS39Q9H9C1 493 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 CYLDQ9NQC7 956 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 GDF3Q9NR23 364 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 HOMER3Q9NSC5 361 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 HESX1Q9UBX0 185 aa16.26■□□□□ 0.19
SGCE-205ENST00000437425 CHORDC1Q9UHD1 332 aaPredicted RBP16.26■□□□□ 0.19
SGCE-205ENST00000437425 FAM187AA6NFU0 413 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 M0QYV0 167 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 HEXIM1O94992 359 aaKnown RBP16.25■□□□□ 0.19
SGCE-205ENST00000437425 INHAP05111 366 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 THP07101 528 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 KRT3P12035 628 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 RPL9P32969 192 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms