RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 ZNF560Q96MR9 790 aa16.96■□□□□ 0.31
CALD1-208ENST00000435928 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
CALD1-208ENST00000435928 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
CALD1-208ENST00000435928 ABI2Q9NYB9 513 aaPredicted RBP16.96■□□□□ 0.31
CALD1-208ENST00000435928 STYXL1Q9Y6J8 313 aa16.96■□□□□ 0.31
CALD1-208ENST00000435928 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
CALD1-208ENST00000435928 IL18RAPO95256 599 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 PAPSS2O95340 614 aaPredicted RBP16.95■□□□□ 0.3
CALD1-208ENST00000435928 WEE1P30291 646 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 POU5F1Q01860 360 aaKnown RBP16.95■□□□□ 0.3
CALD1-208ENST00000435928 SPEM2Q0P670 501 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 PON2Q15165 354 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 WDR44Q5JSH3 913 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 DYMQ7RTS9 669 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 EFCAB13Q8IY85 973 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 GIPC2Q8TF65 315 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 IL21Q9HBE4 155 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 THG1LQ9NWX6 298 aaKnown RBP16.95■□□□□ 0.3
CALD1-208ENST00000435928 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 ZMYM5Q9UJ78 669 aa16.95■□□□□ 0.3
CALD1-208ENST00000435928 SPTBN2O15020 2390 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 KPNA7A9QM74 516 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 CHURC1-FNTBB4DL54 471 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 HAPLN1P10915 354 aaPredicted RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 TGM1P22735 817 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 FNTBP49356 437 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 ATXN1P54253 815 aaKnown RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 TNK2Q07912 1038 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 DMWDQ09019 674 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 SIM2Q14190 667 aaPredicted RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 POSTNQ15063 836 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 LONP2Q86WA8 852 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 NT5DC4Q86YG4 428 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 DCP1BQ8IZD4 617 aaKnown RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 SMG9Q9H0W8 520 aaKnown RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 IKZF4Q9H2S9 585 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
CALD1-208ENST00000435928 SEL1LQ9UBV2 794 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
CALD1-208ENST00000435928 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 K7ESF4 209 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
CALD1-208ENST00000435928 LRP3O75074 770 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 PPP1R37O75864 691 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 RETP07949 1114 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 ADSSP30520 456 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 CNR2P34972 360 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 AVPR1AP37288 418 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 TXLNAP40222 546 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 PNPLA4P41247 253 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 TSPY1Q01534 308 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 CCINQ13939 588 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 ITPRIPL2Q3MIP1 535 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 HEATR6Q6AI08 1181 aaKnown RBP16.93■□□□□ 0.3
CALD1-208ENST00000435928 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 LRRTM3Q86VH5 581 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 CMTM8Q8IZV2 173 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 RTKNQ9BST9 563 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 EXOC7Q9UPT5 735 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 PCDHB5Q9Y5E4 795 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 CLIC4Q9Y696 253 aa16.93■□□□□ 0.3
CALD1-208ENST00000435928 GAP43P17677 238 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 DDX6P26196 483 aaKnown RBP eCLIP16.92■□□□□ 0.3
CALD1-208ENST00000435928 SRSF5Q13243 272 aaKnown RBP16.92■□□□□ 0.3
CALD1-208ENST00000435928 PTPAQ15257 358 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
CALD1-208ENST00000435928 SYNPOQ8N3V7 929 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 ACCSQ96QU6 501 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 FAM213AQ9BRX8 229 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 SLC46A2Q9BY10 475 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.92■□□□□ 0.3
CALD1-208ENST00000435928 GREB1Q4ZG55 1949 aa16.92■□□□□ 0.3
CALD1-208ENST00000435928 HRO43593 1189 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 GCNT3O95395 438 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 ITGB3P05106 788 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 POLR2BP30876 1174 aaKnown RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 NLRP12P59046 1061 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 TFAMQ00059 246 aaKnown RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 KCNA1Q09470 495 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 BFSP1Q12934 665 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 NFE2Q16621 373 aaPredicted RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 PDCL2Q8N4E4 241 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 PI4K2AQ9BTU6 479 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 STRA6Q9BX79 667 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 KIF9Q9HAQ2 790 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 C2orf42Q9NWW7 574 aa16.91■□□□□ 0.3
CALD1-208ENST00000435928 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms