RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 SLC18A3Q16572 532 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 RBM44Q6ZP01 1051 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ACAD11Q709F0 780 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 VSIG1Q86XK7 387 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PROM2Q8N271 834 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 APPL2Q8NEU8 664 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ACTRT1Q8TDG2 376 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 EPS8L3Q8TE67 593 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 SCFD2Q8WU76 684 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 CEP19Q96LK0 163 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 NLRP3Q96P20 1036 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 TRIM55Q9BYV6 548 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 MTMR12Q9C0I1 747 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PCDHA6Q9UN73 950 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PCDHGA11Q9Y5H2 935 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PCDHA8Q9Y5H6 950 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 UMODL1Q5DID0 1318 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ALOX15BO15296 676 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ADCY6O43306 1168 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 XPOTO43592 962 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 SULT1B1O43704 296 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 CCNT1O60563 726 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 KLHL2O95198 593 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 FTCDO95954 541 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 OR52Z1P0C646 297 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 HNRNPFP52597 415 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 EIF3BP55884 814 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 DSG1Q02413 1049 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 KRT71Q3SY84 523 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 USP43Q70EL4 1123 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 INTS8Q75QN2 995 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ADGRA1Q86SQ6 560 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 SATL1Q86VE3 508 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 NELFCDQ8IXH7 590 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 FAM9CQ8IZT9 166 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 FLCNQ8NFG4 579 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 TMA16Q96EY4 203 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 FAM20AQ96MK3 541 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 VPS35Q96QK1 796 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 RUBCNLQ9H714 662 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 USP29Q9HBJ7 922 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 EMC3Q9P0I2 261 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 STK17AQ9UEE5 414 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 APOBEC2Q9Y235 224 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 FOXN3O00409 490 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 EXTL3O43909 919 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PRLP01236 227 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 AFPP02771 609 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 LRRC55Q6ZSA7 311 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 NET1Q7Z628 596 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 DNAJC10Q8IXB1 793 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 ARHGEF2Q92974 986 aaKnown RBP7.69□□□□□ -1.18
GARNL3-205ENST00000435213 PLIN2Q99541 437 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 RNF38Q9H0F5 515 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 SLITRK6Q9H5Y7 841 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 RIC8AQ9NPQ8 531 aa7.69□□□□□ -1.18
GARNL3-205ENST00000435213 CAPN9O14815 690 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 UFL1O94874 794 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 CHN1P15882 459 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 KLRC1P26715 233 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 MARK3P27448 753 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 BCAMP50895 628 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 RPS3AP61247 264 aaKnown RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 CHRNEQ04844 493 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 RUNX1T1Q06455 604 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 PDAP1Q13442 181 aaKnown RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 PTK2BQ14289 1009 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 RPS6KA1Q15418 735 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 NFE2Q16621 373 aaPredicted RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 HERC4Q5GLZ8 1057 aaPredicted RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 KLHDC10Q6PID8 442 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 KLHL7Q8IXQ5 586 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 ATP6V0D2Q8N8Y2 350 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 TLCD1Q96CP7 247 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 EEF2KMTQ96G04 330 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 CALML4Q96GE6 196 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 CD2APQ9Y5K6 639 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 SLIT2O94813 1529 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 ZNF804BA4D1E1 1349 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 ERVV-1B6SEH8 477 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 NKRFO15226 690 aaKnown RBP eCLIP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 GJB6O95452 261 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 SHBGP04278 402 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 RBP3P10745 1247 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 P4HA1P13674 534 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 MAN1A1P33908 653 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 GNL1P36915 607 aaPredicted RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 CLK3P49761 638 aaKnown RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 KCNQ4P56696 695 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 NUP107P57740 925 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 ADAM17P78536 824 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 PRKCEQ02156 737 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 EHHADHQ08426 723 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 TRAP1Q12931 704 aaKnown RBP7.68□□□□□ -1.18
GARNL3-205ENST00000435213 MED21Q13503 144 aa7.68□□□□□ -1.18
GARNL3-205ENST00000435213 TRADDQ15628 312 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms