RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NFS1Q9Y697 457 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 BSPRYQ5W0U4 402 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ERO1BQ86YB8 467 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 C4orf33Q8N1A6 199 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ST6GALNAC4Q9H4F1 302 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ZDHHC18Q9NUE0 388 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 SAMD15Q9P1V8 674 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 OGTO15294 1046 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 STAM2O75886 525 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 YBX3P16989 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ACO1P21399 889 aaKnown RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ADORA2AP29274 412 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 C15orf59Q2T9L4 293 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 FAM102AQ5T9C2 384 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 FEZF2Q8TBJ5 459 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 TIPINQ9BVW5 301 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 C17orf75Q9HAS0 396 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 SNX9Q9Y5X1 595 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 YARSP54577 528 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 FAM228AQ86W67 206 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 RUBCNQ92622 972 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 ARHGEF2Q92974 986 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 MIEF2Q96C03 454 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 PIWIL1Q96J94 861 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 MAGEB5Q9BZ81 275 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 PROSCO94903 275 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 NPTXRO95502 500 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 BPIFB4P59827 614 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 NPNTQ6UXI9 565 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 RDM1Q8NG50 284 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 CHMP6Q96FZ7 201 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-203ENST00000434376 CDT1Q9H211 546 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 NOD2Q9HC29 1040 aa16.43■□□□□ 0.22
SCARF1-203ENST00000434376 CNTNAP2Q9UHC6 1331 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 PPEF2O14830 753 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 UPP2O95045 317 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 KRT3P12035 628 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 ANXA13P27216 316 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 EPHX2P34913 555 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 GCKP35557 465 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 DHX34Q14147 1143 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 NAIF1Q69YI7 327 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 RFX6Q8HWS3 928 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 DNERQ8NFT8 737 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 RPS6KC1Q96S38 1066 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 OSMRQ99650 979 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 NIF3L1Q9GZT8 377 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 GOLGA2P5Q9HBQ8 144 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 LDHAP00338 332 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 KRT15P19012 456 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 TNFRSF8P28908 595 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 PTPN20Q4JDL3 420 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 CELF3Q5SZQ8 465 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 YTHDF3Q7Z739 585 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 ZBED8Q8IZ13 594 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 NSMCE1Q8WV22 266 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 NDRG1Q92597 394 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 CST8O60676 142 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 CETN2P41208 172 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 OAZ1P54368 228 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 TTLL4Q14679 1199 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 BBS9Q3SYG4 887 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 HOOK3Q86VS8 718 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 DDX27Q96GQ7 796 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 XPO6Q96QU8 1125 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 CPXM1Q96SM3 734 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 FAM167BQ9BTA0 163 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 B3GNT5Q9BYG0 378 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 DCLK3Q9C098 648 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 MRPL47Q9HD33 250 aaKnown RBP16.42■□□□□ 0.22
SCARF1-203ENST00000434376 SLC12A6Q9UHW9 1150 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 CPA4Q9UI42 421 aa16.42■□□□□ 0.22
SCARF1-203ENST00000434376 H0YCG3 227 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 RIPK2O43353 540 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 MYBL1P10243 752 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 ADORA2BP29275 332 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms