RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TISP43B9A030 160 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 KCNAB3O43448 404 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 XPOTO43592 962 aaKnown RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 JTBO76095 146 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 RPLP2P05387 115 aaKnown RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 FAM163BP0C2L3 166 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 EBLN1P0CF75 366 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 MYBL2P10244 700 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 KELP23276 732 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 CTGFP29279 349 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 PRDX5P30044 214 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 ZNF135P52742 658 aaPredicted RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 MTMR1Q13613 665 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 KLF9Q13886 244 aaPredicted RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 BOP1Q14137 746 aaKnown RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 TBCCQ15814 346 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 PLAC9Q5JTB6 97 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 VPS53Q5VIR6 699 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 CEP85Q6P2H3 762 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 C1orf43Q9BWL3 253 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 CCDC8Q9H0W5 538 aaPredicted RBP5□□□□□ -1.61
PTPN4-205ENST00000433888 ARHGEF3Q9NR81 526 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 CFAP97Q9P2B7 532 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 USP35Q9P2H5 1018 aa5□□□□□ -1.61
PTPN4-205ENST00000433888 LRRC14BA6NHZ5 514 aa4.99□□□□□ -1.61
PTPN4-205ENST00000433888 KIF20AO95235 890 aa4.99□□□□□ -1.61
PTPN4-205ENST00000433888 NEK8Q86SG6 692 aa4.99□□□□□ -1.61
PTPN4-205ENST00000433888 DTX2Q86UW9 622 aa4.99□□□□□ -1.61
PTPN4-205ENST00000433888 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
PTPN4-205ENST00000433888 RPL36ALQ969Q0 106 aaKnown RBP4.99□□□□□ -1.61
PTPN4-205ENST00000433888 ZNF48Q96MX3 618 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-205ENST00000433888 GNL3LQ9NVN8 582 aaKnown RBP4.99□□□□□ -1.61
PTPN4-205ENST00000433888 SHTN1A0MZ66 631 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 MYO1FO00160 1098 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 MOSPD3O75425 235 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 ZRANB2O95218 330 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTPN4-205ENST00000433888 PDHA1P08559 390 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 FTH1P19P0C7X4 201 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 RARBP10826 455 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 CHRM3P20309 590 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 ITGALP20701 1170 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 EPHB2P29323 1055 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 PHKA1P46020 1223 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 PIK3CGP48736 1102 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 UAP1L1Q3KQV9 507 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 C3orf20Q8ND61 904 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 TBC1D5Q92609 795 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 ZBTB9Q96C00 473 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
PTPN4-205ENST00000433888 BHMT2Q9H2M3 363 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 DLL3Q9NYJ7 618 aa4.98□□□□□ -1.61
PTPN4-205ENST00000433888 H0YIZ8 118 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 PPM1DO15297 605 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 VPS4BO75351 444 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 GNAI3P08754 354 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 CERS1P27544 350 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 MPGP29372 298 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 CD6P30203 668 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 PTGER1P34995 402 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 GCLCP48506 637 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 GNAI1P63096 354 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 TUBA4AP68366 448 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 ETFDHQ16134 617 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 AARS2Q5JTZ9 985 aaKnown RBP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 ANKRD16Q6P6B7 361 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 YTHDF3Q7Z739 585 aaKnown RBP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 USP37Q86T82 979 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 ATRIPQ8WXE1 791 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 TINAGL1Q9GZM7 467 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 MRPL46Q9H2W6 279 aaKnown RBP4.97□□□□□ -1.61
PTPN4-205ENST00000433888 POLHQ9Y253 713 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 PCDHA3Q9Y5H8 950 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 RAD54BQ9Y620 910 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 TNKSO95271 1327 aa4.97□□□□□ -1.61
PTPN4-205ENST00000433888 PPP6CO00743 305 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 ADAMTS3O15072 1205 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 NXPH3O95157 252 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 NDUFB7P17568 137 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SMARCA1P28370 1054 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 GUCY2FP51841 1108 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SUPT20HL1Q3ZLR7 823 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 EFCAB2Q5VUJ9 269 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 MAVSQ7Z434 540 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 PRR18Q8N4B5 295 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTPN4-205ENST00000433888 FCRL4Q96PJ5 515 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 NELL2Q99435 816 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SLC13A1Q9BZW2 595 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SIK2Q9H0K1 926 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 WDCPQ9H6R7 721 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SLAMF7Q9NQ25 335 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 SH3BP4Q9P0V3 963 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 MRFAP1Q9Y605 127 aa4.96□□□□□ -1.62
PTPN4-205ENST00000433888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms