RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SLC12A6Q9UHW9 1150 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 AFG3L2Q9Y4W6 797 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 RIPK3Q9Y572 518 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 BRCA2P51587 3418 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 DOCK5Q9H7D0 1870 aa7.93□□□□□ -1.14
COL17A1-204ENST00000433822 LRRC37A2A6NM11 1700 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CENPFP49454 3210 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ESYT3A0FGR9 886 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ADARB2-AS1A8MUL3 147 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MYO1CO00159 1063 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 EBAG9O00559 213 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CYP26A1O43174 497 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 DAPK3O43293 454 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PSTPIP1O43586 416 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 KRT14P02533 472 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 C4BPAP04003 597 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ITGA4P13612 1032 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 COMTP21964 271 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 LSP1P33241 339 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MDH1P40925 334 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 LIG4P49917 911 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CORO7P57737 925 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 GNGT1P63211 74 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF844Q08AG5 666 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 BYSLQ13895 437 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 NEDD9Q14511 834 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 TMEM132BQ14DG7 1078 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 EMC2Q15006 297 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 TARBP2Q15633 366 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CEP85LQ5SZL2 805 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PLA2G4FQ68DD2 849 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MICALCLQ6ZW33 695 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PHF13Q86YI8 300 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 SLC13A5Q86YT5 568 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 RELL1Q8IUW5 271 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CCDC60Q8IWA6 550 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PRELID2Q8N945 189 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 TAS1R2Q8TE23 839 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 GRK7Q8WTQ7 553 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 P3H4Q92791 437 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF653Q96CK0 615 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 TLCD1Q96CP7 247 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 FNBP1Q96RU3 617 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MPHOSPH6Q99547 160 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 CGRRF1Q99675 332 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 JPH2Q9BR39 696 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 NUP85Q9BW27 656 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 AP1M1Q9BXS5 423 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ROPN1BQ9BZX4 212 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 STMN4Q9H169 189 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PABPC3Q9H361 631 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ROPN1Q9HAT0 212 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 MRPL47Q9HD33 250 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 PRDM6Q9NQX0 595 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 HOMER2Q9NSB8 354 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 WHRNQ9P202 907 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 RRP15Q9Y3B9 282 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ADGRA3Q8IWK6 1321 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 ADGRA2Q96PE1 1338 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 RANBP2P49792 3224 aaKnown RBP7.92□□□□□ -1.14
COL17A1-204ENST00000433822 HTTP42858 3142 aa7.92□□□□□ -1.14
COL17A1-204ENST00000433822 A0A0B4J269 797 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 IQCA1LA6NCM1 817 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TMEM229AB2RXF0 380 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TISP43B9A030 160 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 DLL1O00548 723 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SPOPO43791 374 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 LSM8O95777 96 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 FAM107AO95990 144 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 EGFRP00533 1210 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 MMEP08473 750 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 RARGP13631 454 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 EPHX2P34913 555 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 COILP38432 576 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 MAGEA9P43362 315 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SLC26A2P50443 739 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 DNA2P51530 1060 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 GUCY2FP51841 1108 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TAP1Q03518 808 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 ADCY2Q08462 1091 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 DRP2Q13474 957 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SIX1Q15475 284 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF568Q3ZCX4 644 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TNFAIP8L3Q5GJ75 292 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 LIN9Q5TKA1 542 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 LRRC38Q5VT99 294 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 FAM160B1Q5W0V3 765 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 CST9Q5W186 159 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 CDCA2Q69YH5 1023 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 MFSD5Q6N075 450 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SWSAP1Q6NVH7 229 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 ZDHHC24Q6UX98 284 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TRMT10CQ7L0Y3 403 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 MAEAQ7L5Y9 396 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms