RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CCP110O43303 1012 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 PIP5K1CO60331 668 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 TLR5O60602 858 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 ERN1O75460 977 aaKnown RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 HSD3B1P14060 373 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 TPH1P17752 444 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 PAX3P23760 479 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 SLC6A2P23975 617 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 ACVR2AP27037 513 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 CNR2P34972 360 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 HTRA4P83105 476 aaPredicted RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 ARL6IP4Q66PJ3 421 aaKnown RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 KRT73Q86Y46 540 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 LRRC56Q8IYG6 542 aaPredicted RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 DNERQ8NFT8 737 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 OR56A3Q8NH54 315 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 GNRHR2Q96P88 292 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 MED15Q96RN5 788 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 TRIB1Q96RU8 372 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 HEPHQ9BQS7 1158 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 ZCWPW1Q9H0M4 648 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 LRFN1Q9P244 771 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 RGS17Q9UGC6 210 aaPredicted RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 MID2Q9UJV3 735 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 ZFR2Q9UPR6 939 aaKnown RBP7.05□□□□□ -1.28
USP54-206ENST00000433394 RAD54BQ9Y620 910 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 AQP7P3A6NL99 342 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 RAB27BO00194 218 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 VPS4BO75351 444 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 RECQL4O94761 1208 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 GCSHP23434 173 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 LRPAP1P30533 357 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 RENBPP51606 427 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 COPAP53621 1224 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 PRKG1Q13976 671 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 ARHGEF7Q14155 803 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 UBXN11Q5T124 520 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 RRAGBQ5VZM2 374 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 ANKRD18AQ8IVF6 992 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 CYP2W1Q8TAV3 490 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 TRAPPC12Q8WVT3 735 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
USP54-206ENST00000433394 RMDN3Q96TC7 470 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.04□□□□□ -1.28
USP54-206ENST00000433394 CPEB1Q9BZB8 566 aaKnown RBP7.04□□□□□ -1.28
USP54-206ENST00000433394 TTYH3Q9C0H2 523 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP54-206ENST00000433394 DHX36Q9H2U1 1008 aaKnown RBP7.04□□□□□ -1.28
USP54-206ENST00000433394 FAM83DQ9H4H8 585 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 NECTIN3Q9NQS3 549 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 EIF2B4Q9UI10 523 aaKnown RBP7.04□□□□□ -1.28
USP54-206ENST00000433394 DGKBQ9Y6T7 804 aa7.04□□□□□ -1.28
USP54-206ENST00000433394 CCDC195A0A1B0GUA6 201 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 TMEM233B4DJY2 109 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 FGAP02671 866 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 HLA-DOAP06340 250 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 ITGALP20701 1170 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 TXKP42681 527 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 CPT1AP50416 773 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 POLE2P56282 527 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 FSTL1Q12841 308 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 FOXL1Q12952 345 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 PFKFB4Q16877 469 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 PREPLQ4J6C6 727 aaPredicted RBP7.03□□□□□ -1.28
USP54-206ENST00000433394 PLA1AQ53H76 456 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 ALFQ53S48 1182 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 TAPT1Q6NXT6 567 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 MZT2AQ6P582 158 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 KRT28Q7Z3Y7 464 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 GATAD2AQ86YP4 633 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 CFAP52Q8N1V2 620 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 ATG16L2Q8NAA4 619 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 SLC46A1Q96NT5 459 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 MEGF9Q9H1U4 602 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 DACT1Q9NYF0 836 aa7.03□□□□□ -1.28
USP54-206ENST00000433394 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
USP54-206ENST00000433394 TOR1BO14657 336 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 IRAK2O43187 625 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 PLATP00750 562 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 PXNP49023 591 aaPredicted RBP7.02□□□□□ -1.29
USP54-206ENST00000433394 LOXL3P58215 753 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 NHLH2Q02577 135 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 CRHR2Q13324 411 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 CNGB1Q14028 1251 aaPredicted RBP7.02□□□□□ -1.29
USP54-206ENST00000433394 ZNF124Q15973 351 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 NOMO2Q5JPE7 1267 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 CACHD1Q5VU97 1274 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 CCDC70Q6NSX1 233 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 GAS2L3Q86XJ1 694 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 FUKQ8N0W3 1084 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 VGLL2Q8N8G2 317 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 FMNL2Q96PY5 1086 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 GJB4Q9NTQ9 266 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 ANAPC4Q9UJX5 808 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 AGAP1Q9UPQ3 857 aa7.02□□□□□ -1.29
USP54-206ENST00000433394 FAM234BA2RU67 622 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms