RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
CCDC171-202ENST00000432954 MYH7BA7E2Y1 1941 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MYH2Q9UKX2 1941 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 NPHP3-ACAD11A0A0J9YXS1 232 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 A6NL46 340 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 H0Y858 1186 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 RTCAO00442 366 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 HOXC11O43248 304 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TBX10O75333 385 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 EYA4O95677 639 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 FAM153BP0C7A2 387 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 VAMP1P23763 118 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TARSP26639 723 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MARK3P27448 753 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 SHMT1P34896 483 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 COPB1P53618 953 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MAGOHP61326 146 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 RNASELQ05823 741 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 RAD51Q06609 339 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 SNTA1Q13424 505 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 FAM153CQ494X1 144 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 AARS2Q5JTZ9 985 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CCDC25Q86WR0 208 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 SPATA4Q8NEY3 305 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 NCLNQ969V3 563 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MAGOHBQ96A72 148 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CNDP1Q96KN2 507 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ZNF717Q9BY31 904 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MRPS26Q9BYN8 205 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 HOXD1Q9GZZ0 328 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CUEDC2Q9H467 287 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 USP40Q9NVE5 1235 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ANKMY1Q9P2S6 941 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 EPS15L1Q9UBC2 864 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 DNAJB4Q9UDY4 337 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 FAM153AQ9UHL3 310 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 COL4A3BPQ9Y5P4 624 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PZPP20742 1482 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 A0A1W2PQ27 194 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 A0A1W2PQ64 194 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 A0A1W2PQD8 194 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 USP1O94782 785 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PCSK2P16519 638 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PHKA1P46020 1223 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 HARS2P49590 506 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 STX1BP61266 288 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TRIM32Q13049 653 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CLUL1Q15846 466 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PLA2G4EQ3MJ16 856 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 C6orf10Q5SRN2 563 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 VARS2Q5ST30 1063 aaKnown RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PXDC1Q5TGL8 231 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TMC5Q6UXY8 1006 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TAS2R42Q7RTR8 314 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 NKAIN3Q8N8D7 197 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 FSIP1Q8NA03 581 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 KCNG4Q8TDN1 519 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 DDI1Q8WTU0 396 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 RANBP9Q96S59 729 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CCDC106Q9BWC9 280 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TBC1D10AQ9BXI6 508 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 KLHL25Q9H0H3 589 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TP63Q9H3D4 680 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-202ENST00000432954 THAP9Q9H5L6 903 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 DBNDD1Q9H9R9 158 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 CYP4F12Q9HCS2 524 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 FAM8A1Q9UBU6 413 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 TBX22Q9Y458 520 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 ZNF175Q9Y473 711 aa11.43□□□□□ -0.58
CCDC171-202ENST00000432954 PCDH11YQ9BZA8 1340 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CEP152O94986 1710 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 MFAP3LO75121 409 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 COBLO75128 1261 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CLPTM1O96005 669 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 ITGB1P05556 798 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 ITGA2P17301 1181 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 LRPAP1P30533 357 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 L1CAMP32004 1257 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 MMP13P45452 471 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CHN2P52757 468 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 LIMK1P53667 647 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 C21orf59P57076 290 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 NLRP11P59045 1033 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 OCA2Q04671 838 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms