RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RRAGBQ5VZM2 374 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 TBC1D9BQ66K14 1250 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 KIF18BQ86Y91 864 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 TTLL11Q8NHH1 800 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CARD14Q9BXL6 1004 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 ASPSCR1Q9BZE9 553 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 EHD4Q9H223 541 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 OCEL1Q9H607 264 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-203ENST00000430976 CTTNBP2NLQ9P2B4 639 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GRID1Q9ULK0 1009 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GPSM3Q9Y4H4 160 aa5.62□□□□□ -1.51
PTPN4-203ENST00000430976 GPR89AB7ZAQ6 455 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PDPK1O15530 556 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GCATO75600 419 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CCNKO75909 580 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RETP07949 1114 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 SNRPAP09012 282 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 LINGO3P0C6S8 592 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GPR89BP0CG08 455 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GJA1P17302 382 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CCNFP41002 786 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CRKLP46109 303 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RAD23BP54727 409 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PRAMEP78395 509 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 EXOC3L1Q86VI1 746 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TICAM1Q8IUC6 712 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CDH26Q8IXH8 852 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 XXYLT1Q8NBI6 393 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TTLQ8NG68 377 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PLBD2Q8NHP8 589 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 UBLCP1Q8WVY7 318 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CITED4Q96RK1 184 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 USP28Q96RU2 1077 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CGREF1Q99674 301 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RBM4BQ9BQ04 359 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 USB1Q9BQ65 265 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 LRRC1Q9BTT6 524 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RBM4Q9BWF3 364 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 LMAN2LQ9H0V9 348 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 SMYD3Q9H7B4 428 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 FANCEQ9HB96 536 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 VPS4AQ9UN37 437 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 SRPK3Q9UPE1 567 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CORO2BQ9UQ03 480 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 POLHQ9Y253 713 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PCDHGB1Q9Y5G3 927 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TISP43B9A030 160 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 B9A039 149 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 DDX3XO00571 662 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RNF113AO15541 343 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 DOK2O60496 412 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 MITFO75030 526 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GGPS1O95749 300 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RB1P06400 928 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GLI1P08151 1106 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 QDPRP09417 244 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 ANXA8P13928 327 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 NEK4P51957 841 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 STX17P56962 302 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RNASE9P60153 205 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 MRPS9P82933 396 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 LACTBP83111 547 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PLOD1Q02809 727 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 ENPEPQ07075 957 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 R3HDM1Q15032 1099 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 FAM76BQ5HYJ3 339 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 ANXA8L1Q5VT79 327 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RNF220Q5VTB9 566 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 DPY19L2Q6NUT2 758 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TAS2R42Q7RTR8 314 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 P3H2Q8IVL5 708 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TCP11L2Q8N4U5 519 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 OR6J1Q8NGC5 347 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 SCFD2Q8WU76 684 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 GTF3C2Q8WUA4 911 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 RSC1A1Q92681 617 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 TANKQ92844 425 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 ADIPOR1Q96A54 375 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 METTL2AQ96IZ6 378 aaKnown RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 C9orf16Q9BUW7 83 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 ACPTQ9BZG2 426 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 MTMR4Q9NYA4 1195 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 CTNNAL1Q9UBT7 734 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 VPS51Q9UID3 782 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PPT2Q9UMR5 302 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PCDHB8Q9UN66 801 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 MINK1Q8N4C8 1332 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-203ENST00000430976 NPC1L1Q9UHC9 1359 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 A0A1W2PPL8 197 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PTPDC1A2A3K4 754 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 MOXD2PA6NHM9 499 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 SLC9B1P1A6NJY1 282 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R3GB7ZBB8 358 aa5.61□□□□□ -1.51
PTPN4-203ENST00000430976 FGFR2P21802 821 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms