RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	COL4A2	P08572	1712 aa		19.13	■□□□□ 0.65
MRPL28-203	ENST00000429738	KMT2B	Q9UMN6	2715 aa	Predicted RBP	19.13	■□□□□ 0.65
MRPL28-203	ENST00000429738	KPNA7	A9QM74	516 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	KIAA0391	O15091	583 aa	Known RBP	19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	MYL4	P12829	197 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	HOXD13	P35453	343 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	PNPLA4	P41247	253 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	AMPD3	Q01432	767 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	EHHADH	Q08426	723 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	SV2C	Q496J9	727 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	WSCD1	Q658N2	575 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	ATL3	Q6DD88	541 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	SHKBP1	Q8TBC3	707 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	HPS3	Q969F9	1004 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	ZSWIM3	Q96MP5	696 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	ZNF560	Q96MR9	790 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	C7orf25	Q9BPX7	421 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	IER2	Q9BTL4	223 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	TRMT61B	Q9BVS5	477 aa	Known RBP	19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	MAGEF1	Q9HAY2	307 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	TRPV4	Q9HBA0	871 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	PARD6A	Q9NPB6	346 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	PCDHA7	Q9UN72	937 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	SLC27A5	Q9Y2P5	690 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	ASB3	Q9Y575	518 aa		19.12	■□□□□ 0.65
MRPL28-203	ENST00000429738	DCDC2B	A2VCK2	349 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	GOLGA8IP	A6NC78	632 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	GOLGA8J	A6NMD2	632 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	EIF3D	O15371	548 aa	Known RBP eCLIP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	KRT37	O76014	449 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	HSP90AA1	P07900	732 aa	Known RBP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	TDGF1	P13385	188 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	GJA1	P17302	382 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	ALDH1A3	P47895	512 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	EPHB3	P54753	998 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	TFAM	Q00059	246 aa	Known RBP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	SMARCB1	Q12824	385 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	GRM2	Q14416	872 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	PPP2R5D	Q14738	602 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	TEAD2	Q15562	447 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	SCARA3	Q6AZY7	606 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	STXBP4	Q6ZWJ1	553 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	EPM2AIP1	Q7L775	607 aa	Predicted RBP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	LRRTM3	Q86VH5	581 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	GPD1L	Q8N335	351 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	CELF5	Q8N6W0	485 aa	Known RBP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	SMARCD2	Q92925	531 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	IRF7	Q92985	503 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	PSMG2	Q969U7	264 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	PCIF1	Q9H4Z3	704 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	TRPV5	Q9NQA5	729 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	RAB23	Q9ULC3	237 aa		19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	NDRG2	Q9UN36	371 aa	Known RBP	19.11	■□□□□ 0.65
MRPL28-203	ENST00000429738	NUP210	Q8TEM1	1887 aa	Predicted RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	POLR2D	O15514	142 aa	Known RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	ITGB3	P05106	788 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	POLR2B	P30876	1174 aa	Known RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	ASIC1	P78348	528 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	SLC39A12	Q504Y0	691 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	METTL23	Q86XA0	190 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	THEM5	Q8N1Q8	247 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	LRRC52	Q8N7C0	313 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	ZNF507	Q8TCN5	953 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	C2orf15	Q8WU43	125 aa	Known RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	CACTIN	Q8WUQ7	758 aa	Known RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	GPR88	Q9GZN0	384 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	LMAN1L	Q9HAT1	526 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	PDE11A	Q9HCR9	933 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	ZNF334	Q9HCZ1	680 aa	Predicted RBP	19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	DENND4C	Q5VZ89	1909 aa		19.1	■□□□□ 0.65
MRPL28-203	ENST00000429738	NCAN	O14594	1321 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738		A0A1W2PRU2	124 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	SOAT2	O75908	522 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	PSMC3	P17980	439 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	TUFM	P49411	452 aa	Known RBP	19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	RESP18	Q5W5W9	173 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	VIT	Q6UXI7	678 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	UNC13D	Q70J99	1090 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	GAREM2	Q75VX8	874 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	FAM3C	Q92520	227 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	FAM84A	Q96KN4	292 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	MKNK1	Q9BUB5	465 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	GDAP2	Q9NXN4	497 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	SIX4	Q9UIU6	781 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	RCOR1	Q9UKL0	485 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	ITGA11	Q9UKX5	1188 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	CFAP45	Q9UL16	551 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	AGAP1	Q9UPQ3	857 aa		19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	MAP1B	P46821	2468 aa	Known RBP	19.09	■□□□□ 0.65
MRPL28-203	ENST00000429738	CNOT1	A5YKK6	2376 aa	Known RBP	19.08	■□□□□ 0.65
MRPL28-203	ENST00000429738	CHD8	Q9HCK8	2581 aa		19.08	■□□□□ 0.65
MRPL28-203	ENST00000429738	TICRR	Q7Z2Z1	1910 aa		19.08	■□□□□ 0.65
MRPL28-203	ENST00000429738	TGFB1I1	O43294	461 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	ATF6	P18850	670 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	GDI1	P31150	447 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	CCR3	P51677	355 aa		19.08	■□□□□ 0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms