RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 ACSF2Q96CM8 615 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 GRAMD1AQ96CP6 724 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 CAMKK2Q96RR4 588 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 TACO1Q9BSH4 297 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 KLHL14Q9P2G3 628 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 SPAG7O75391 227 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ASMTLO95671 621 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 EZRP15311 586 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 STXBP2Q15833 593 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 HP1BP3Q5SSJ5 553 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 PPP1R15BQ5SWA1 713 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 RNASEH2BQ5TBB1 312 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 DCUN1D2Q6PH85 259 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 HAUS1Q96CS2 278 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 IGKV6D-21A0A0A0MT36 114 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 POC1B-GALNT4F8VUJ3 575 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ADCY3O60266 1144 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 FAM189A1O60320 539 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 AP3M2P53677 418 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 SATB1Q01826 763 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ACVR2BQ13705 512 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF394Q53GI3 561 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 DNAJC14Q6Y2X3 702 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 CATSPERGQ6ZRH7 1159 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 ANKLE1Q8NAG6 615 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 DENND1AQ8TEH3 1009 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 NKD2Q969F2 451 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 KLHL29Q96CT2 875 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 PAIP2Q9BPZ3 127 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 PITPNM3Q9BZ71 974 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 MTMR12Q9C0I1 747 aa14.04□□□□□ -0.16
SNRNP200-202ENST00000429650 PRPF4O43172 522 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ITGAVP06756 1048 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 RPS12P25398 132 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 RFC5P40937 340 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 CDKN2BP42772 138 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 MYL6P60660 151 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 PIGHQ14442 188 aaPredicted RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 TARBP2Q15633 366 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 GPAT2Q6NUI2 795 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ZPBP2Q6X784 338 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 FAM47EQ6ZV65 393 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ECHDC2Q86YB7 292 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 WDTC1Q8N5D0 677 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 TBC1D31Q96DN5 1066 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 PCYT2Q99447 389 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 CISHQ9NSE2 258 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 LOC285556D6RIA3 1793 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 LRRD1A4D1F6 860 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ALOX15BO15296 676 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 MAGEB2O15479 319 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ASRGL1Q7L266 308 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 RPAINQ86UA6 219 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 KIF2BQ8N4N8 673 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 TMEM121Q9BTD3 319 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF518BQ9C0D4 1074 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 NIF3L1Q9GZT8 377 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 VPS37BQ9H9H4 285 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 KIF9Q9HAQ2 790 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 PCDH9Q9HC56 1237 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 ARHGEF3Q9NR81 526 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 DDX56Q9NY93 547 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 SHOC2Q9UQ13 582 aa14.03□□□□□ -0.16
SNRNP200-202ENST00000429650 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 ALADP13716 330 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 CDH5P33151 784 aaPredicted RBP14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 SLC18A1P54219 525 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 CNTN2Q02246 1040 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 TAP1Q03518 808 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 GRM1Q13255 1194 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 CYP4A22Q5TCH4 519 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 CAPN12Q6ZSI9 719 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 ZBED8Q8IZ13 594 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 TFAP2BQ92481 460 aa14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 PRCCQ92733 491 aaPredicted RBP14.02□□□□□ -0.16
SNRNP200-202ENST00000429650 SGK1O00141 431 aa14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 HGSO14964 777 aaPredicted RBP14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 IFNB1P01574 187 aa14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 KRT16P08779 473 aa14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 KRT15P19012 456 aa14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.17
SNRNP200-202ENST00000429650 GMPSP49915 693 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms