RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 BECN2A8MW95 431 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 PDGFRBP09619 1106 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 KCNA5P22460 613 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 TSPY1Q01534 308 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 GPR17Q13304 367 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 SLC39A12Q504Y0 691 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 INTS6LQ5JSJ4 861 aaKnown RBP23.86■■□□□ 1.41
PTPN18-205ENST00000428843 LRSAM1Q6UWE0 723 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 LRRTM3Q86VH5 581 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 HDAC7Q8WUI4 952 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 FAXDC2Q96IV6 333 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 MSLNLQ96KJ4 702 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 PGLYRP2Q96PD5 576 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 INTS2Q9H0H0 1204 aaKnown RBP23.86■■□□□ 1.41
PTPN18-205ENST00000428843 CYP3A43Q9HB55 503 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 AFF4Q9UHB7 1163 aaKnown RBP23.86■■□□□ 1.41
PTPN18-205ENST00000428843 DPP7Q9UHL4 492 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 CDH9Q9ULB4 789 aa23.86■■□□□ 1.41
PTPN18-205ENST00000428843 SPDYE4A6NLX3 237 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 H3BQ06 376 aaPredicted RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 PES1O00541 588 aaKnown RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 VNN2O95498 520 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 CAVIN2O95810 425 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 ATF2P15336 505 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 CDK11BP21127 795 aaKnown RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 ADCY1Q08828 1119 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 SYCE2Q6PIF2 218 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 DCP1BQ8IZD4 617 aaKnown RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 C12orf76Q8N812 135 aaPredicted RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 NT5C1BQ96P26 610 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 PKMYT1Q99640 499 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 SYT15Q9BQS2 421 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 CRACR2AQ9BSW2 395 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 VPS16Q9H269 839 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 TMLHEQ9NVH6 421 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 GCNT4Q9P109 453 aa23.85■■□□□ 1.41
PTPN18-205ENST00000428843 LIMA1Q9UHB6 759 aaKnown RBP23.85■■□□□ 1.41
PTPN18-205ENST00000428843 GTPBP10A4D1E9 387 aaKnown RBP23.84■■□□□ 1.41
PTPN18-205ENST00000428843 MTMR11A4FU01 709 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 A8MXQ7 604 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 ATP2C2O75185 946 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 SEC24AO95486 1093 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 ELF1P32519 619 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 CDR1P51861 262 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 PSMC1P62191 440 aaKnown RBP23.84■■□□□ 1.41
PTPN18-205ENST00000428843 CLUL1Q15846 466 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 ELMSAN1Q6PJG2 1045 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 GBP6Q6ZN66 633 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 LUZP1Q86V48 1076 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 ANKRD20A12PQ8NF67 263 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 ARID3AQ99856 593 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 APOL5Q9BWW9 433 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 TSPY26PQ9H489 355 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 SFXN1Q9H9B4 322 aa23.84■■□□□ 1.41
PTPN18-205ENST00000428843 C8AP07357 584 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 TPM2P07951 284 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 ATP1A3P13637 1013 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 HOXB8P17481 243 aaPredicted RBP23.83■■□□□ 1.41
PTPN18-205ENST00000428843 NDST1P52848 882 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 TFF2Q03403 129 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 CUL2Q13617 745 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 CCDC142Q17RM4 750 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 LIN9Q5TKA1 542 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 ATAD1Q8NBU5 361 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 SLC7A14Q8TBB6 771 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 DPEP3Q9H4B8 488 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 CYP4F11Q9HBI6 524 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 CRTAC1Q9NQ79 661 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 THEGQ9P2T0 379 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 CD207Q9UJ71 328 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 GTF3C4Q9UKN8 822 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 MAFFQ9ULX9 164 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 COL6A3P12111 3177 aa23.83■■□□□ 1.41
PTPN18-205ENST00000428843 MYBPHLA2RUH7 354 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 RFPL2O75678 378 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 ZMYND10O75800 440 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 CD58P19256 250 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 SLC9A1P19634 815 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 COPB1P53618 953 aaKnown RBP23.82■■□□□ 1.4
PTPN18-205ENST00000428843 INCA1Q0VD86 236 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 SMARCB1Q12824 385 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 EXOC3L4Q17RC7 722 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 RARS2Q5T160 578 aaKnown RBP23.82■■□□□ 1.4
PTPN18-205ENST00000428843 FAM171BQ6P995 826 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 CCDC149Q6ZUS6 474 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 ARHGEF19Q8IW93 802 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 TCEAL8Q8IYN2 117 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 FEZF2Q8TBJ5 459 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 FAM200AQ8TCP9 573 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 S1PR5Q9H228 398 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 CRISPLD1Q9H336 500 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 HMGXB4Q9UGU5 601 aa23.82■■□□□ 1.4
PTPN18-205ENST00000428843 LRRC10BA6NIK2 292 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 PRRG1O14668 218 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 PTPN1P18031 435 aaKnown RBP23.81■■□□□ 1.4
PTPN18-205ENST00000428843 TBXAS1P24557 533 aaPredicted RBP23.81■■□□□ 1.4
PTPN18-205ENST00000428843 ZNF445P59923 1031 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 DUSP4Q13115 394 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 UVSSAQ2YD98 709 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 LEXMQ3ZCV2 418 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms