RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SLC51AQ86UW1 340 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SYTL5Q8TDW5 730 aaPredicted RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 GIPC2Q8TF65 315 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 MROH8Q9H579 483 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 TAF1DQ9H5J8 278 aaPredicted RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 SLC25A13Q9UJS0 675 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SUPT3HB4E1H0 165 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 TSPAN3O60637 253 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 PEX10O60683 326 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SUPT3HO75486 399 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNX13-203ENST00000428135 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SNX31Q8N9S9 440 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 BLOC1S5Q8TDH9 187 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 NR1H4Q96RI1 486 aaPredicted RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 CIPCQ9C0C6 399 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 MAFGO15525 162 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 CHRM3P20309 590 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 HMOX2P30519 316 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SHMT1P34896 483 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 GCLCP48506 637 aaPredicted RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 EFTUD2Q15029 972 aaKnown RBP eCLIP10.18□□□□□ -0.783e-6■■□□□ 13.2
SNX13-203ENST00000428135 EMBQ6PCB8 327 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 ADGRF2Q8IZF7 708 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 NUP93Q8N1F7 819 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SPATA4Q8NEY3 305 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 ANKEF1Q9NU02 776 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 SPDYE7PQ495Y7 208 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 MFSD4BQ5TF39 518 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 DDX42Q86XP3 938 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNX13-203ENST00000428135 CCDC124Q96CT7 223 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 AGO4Q9HCK5 861 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 XPNPEP3Q9NQH7 507 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 AAASQ9NRG9 546 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 CD274Q9NZQ7 290 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 ZC3H7BQ9UGR2 993 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 HNRNPCL2B2RXH8 293 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 HNRNPCL1O60812 293 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 ASS1P00966 412 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNX13-203ENST00000428135 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 EDEM1Q92611 657 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 MAGEB10Q96LZ2 347 aaPredicted RBP10.18□□□□□ -0.78
SNX13-203ENST00000428135 APOL2Q9BQE5 337 aa10.18□□□□□ -0.78
SNX13-203ENST00000428135 A0A1W2PQC6 194 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 ARHGAP10A1A4S6 786 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 TADA3O75528 432 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 URODP06132 367 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 THP07101 528 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PLIN5Q00G26 463 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 LAMTOR4Q0VGL1 99 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 DDI1Q8WTU0 396 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 COPS5Q92905 334 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 SERPINI1Q99574 410 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 CINPQ9BW66 212 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 THAP2Q9H0W7 228 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 FAM95CA0A1B0GW59 222 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 CUL2Q13617 745 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 GRIK4Q16099 956 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 ATL2Q8NHH9 583 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PNMA8BQ9ULN7 279 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 PCDHB2Q9Y5E7 798 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 MROH1Q8NDA8 1641 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 GLTPD2A6NH11 291 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 HIST1H2AGP0C0S8 130 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 HIST1H2ADP20671 130 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 BTKQ06187 659 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PGM5Q15124 567 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 HIST1H2AHQ96KK5 128 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 HIST1H2AJQ99878 128 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 H2AFJQ9BTM1 129 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 TASP1Q9H6P5 420 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 UBQLN1Q9UMX0 589 aaKnown RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 NCF1BA6NI72 391 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 NCF1CA8MVU1 366 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 NCF1P14598 390 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 RFX3P48380 749 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PIGHQ14442 188 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 DENND5BQ6ZUT9 1274 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 FGFR1OP2Q9NVK5 253 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 VWA5AO00534 786 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 ZNF263O14978 683 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 MYO1DO94832 1006 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PGK1P00558 417 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 MYL6P60660 151 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 BFSP2Q13515 415 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 LRRC8EQ6NSJ5 796 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms