RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 NPAS3Q8IXF0 933 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 TOP6BLQ8N6T0 577 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 GPR152Q8TDT2 470 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 GIPC2Q8TF65 315 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 KBTBD7Q8WVZ9 684 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 FGF14Q92915 247 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 ASIC4Q96FT7 647 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 TIGD1Q96MW7 591 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 MRPL45Q9BRJ2 306 aaKnown RBP15.96■□□□□ 0.15
RTN4-210ENST00000427710 PI4K2AQ9BTU6 479 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 ZNF334Q9HCZ1 680 aaPredicted RBP15.96■□□□□ 0.15
RTN4-210ENST00000427710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.96■□□□□ 0.159e-8■■■■■ 38.9
RTN4-210ENST00000427710 FRMD4BQ9Y2L6 1034 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 NME7Q9Y5B8 376 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 NUMBLQ9Y6R0 609 aa15.96■□□□□ 0.15
RTN4-210ENST00000427710 KINO60870 393 aaKnown RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 MOSPD3O75425 235 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 AKAP3O75969 853 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 SMC2O95347 1197 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 VNN1O95497 513 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 C4BPAP04003 597 aaKnown RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 PDGFRBP09619 1106 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 ALDH1A3P47895 512 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 PSMC1P62191 440 aaKnown RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 MYL7Q01449 175 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 TSPY1Q01534 308 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 TDGQ13569 410 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 HTR4Q13639 388 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 ZNF658Q5TYW1 1059 aaPredicted RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 SDHAF4Q5VUM1 108 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 IQCEQ6IPM2 695 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 PDZD4Q76G19 769 aaPredicted RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 DCP1BQ8IZD4 617 aaKnown RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 TMEM86AQ8N2M4 240 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 PBXIP1Q96AQ6 731 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 KXD1Q9BQD3 176 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 MMRN2Q9H8L6 949 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 RMND1Q9NWS8 449 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 IGSF9Q9P2J2 1179 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 NXF1Q9UBU9 619 aaKnown RBP15.95■□□□□ 0.14
RTN4-210ENST00000427710 MAN1B1Q9UKM7 699 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 GTF3C4Q9UKN8 822 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 MAFFQ9ULX9 164 aa15.95■□□□□ 0.14
RTN4-210ENST00000427710 MYBPHLA2RUH7 354 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 TRIM49BA6NDI0 452 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 ANHXE9PGG2 379 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 HAPLN1P10915 354 aaPredicted RBP15.94■□□□□ 0.14
RTN4-210ENST00000427710 ATF6P18850 670 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 RAP1GAPP47736 663 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 VAMP7P51809 220 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 PMS1P54277 932 aaKnown RBP15.94■□□□□ 0.14
RTN4-210ENST00000427710 EPHB3P54753 998 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 ADAM9Q13443 819 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 TEAD2Q15562 447 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 WDR72Q3MJ13 1102 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 ZCWPW2Q504Y3 356 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 INTS6LQ5JSJ4 861 aaKnown RBP15.94■□□□□ 0.14
RTN4-210ENST00000427710 SCARA5Q6ZMJ2 495 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 LIMS2Q7Z4I7 341 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 TMC8Q8IU68 726 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 FAM186BQ8IYM0 893 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 SLC44A3Q8N4M1 653 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 SPATA20Q8TB22 786 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 GSDMAQ96QA5 445 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 LRRC3Q9BY71 257 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 SMYD3Q9H7B4 428 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 ASAH2Q9NR71 780 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 PCDHB5Q9Y5E4 795 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 COL4A3Q01955 1670 aa15.94■□□□□ 0.14
RTN4-210ENST00000427710 KIF26AQ9ULI4 1882 aaPredicted RBP15.94■□□□□ 0.14
RTN4-210ENST00000427710 NUP210Q8TEM1 1887 aaPredicted RBP15.93■□□□□ 0.14
RTN4-210ENST00000427710 BIN1O00499 593 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 GABRDO14764 452 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 CFHP08603 1231 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
RTN4-210ENST00000427710 CYP2F1P24903 491 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 LHX1P48742 406 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 TNNC1P63316 161 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 PLD1Q13393 1074 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 NCOA4Q13772 614 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 NFIL3Q16649 462 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 CYP4A22Q5TCH4 519 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 SPOPLQ6IQ16 392 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 DNAJB7Q7Z6W7 309 aaPredicted RBP15.93■□□□□ 0.14
RTN4-210ENST00000427710 UBALD2Q8IYN6 164 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 SHKBP1Q8TBC3 707 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 TMC2Q8TDI7 906 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 TMEM174Q8WUU8 243 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 ZSWIM3Q96MP5 696 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 PKMYT1Q99640 499 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 SYT15Q9BQS2 421 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 ACBD6Q9BR61 282 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 PLA2G2FQ9BZM2 168 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 XYLT2Q9H1B5 865 aa15.93■□□□□ 0.14
RTN4-210ENST00000427710 AVENQ9NQS1 362 aaPredicted RBP15.93■□□□□ 0.14
RTN4-210ENST00000427710 HOOK1Q9UJC3 728 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms