RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 TBCCQ15814 346 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 MTX3Q5HYI7 312 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 PLAC9Q5JTB6 97 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 VPS53Q5VIR6 699 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 BHLHA9Q7RTU4 235 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 PPP1R32Q7Z5V6 425 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 PNMA8AQ86V59 439 aaPredicted RBP4.57□□□□□ -1.68
LINC02541-201ENST00000427157 FAM109AQ8N4B1 249 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 KLHDC4Q8TBB5 520 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 FAM136AQ96C01 138 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 TINAGL1Q9GZM7 467 aaPredicted RBP4.57□□□□□ -1.68
LINC02541-201ENST00000427157 SERTAD4Q9NUC0 356 aa4.57□□□□□ -1.68
LINC02541-201ENST00000427157 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 TP73O15350 636 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 SOAT2O75908 522 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 ZRANB2O95218 330 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC02541-201ENST00000427157 PDHA1P08559 390 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 PRR35P0CG20 571 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 JUPP14923 745 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 KIF22Q14807 665 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 EFCAB2Q5VUJ9 269 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF66Q6ZN08 573 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF551Q7Z340 670 aaPredicted RBP4.56□□□□□ -1.68
LINC02541-201ENST00000427157 FAM90A1Q86YD7 464 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF366Q8N895 744 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 C9orf106Q8NAJ2 232 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 SERHLQ9NQF3 203 aa4.56□□□□□ -1.68
LINC02541-201ENST00000427157 NXPH3O95157 252 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 LATS1O95835 1130 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 FTH1P19P0C7X4 201 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 CDK11BP21127 795 aaKnown RBP4.55□□□□□ -1.68
LINC02541-201ENST00000427157 BMPR2Q13873 1038 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF626Q68DY1 528 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 C3orf20Q8ND61 904 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 ATRIPQ8WXE1 791 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 REPS1Q96D71 796 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 SIK2Q9H0K1 926 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 ARHGEF3Q9NR81 526 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 PCDHA3Q9Y5H8 950 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 RAD54BQ9Y620 910 aa4.55□□□□□ -1.68
LINC02541-201ENST00000427157 PROB1E7EW31 1015 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 M0QYG6 137 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF213O14771 459 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 PPM1DO15297 605 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 NDUFB7P17568 137 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 EPHB2P29323 1055 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 GCLCP48506 637 aaPredicted RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 KRTAP10-9P60411 292 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 NOGQ13253 232 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 KLF9Q13886 244 aaPredicted RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 BOP1Q14137 746 aaKnown RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 FAM50AQ14320 339 aaKnown RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 PTPN21Q16825 1174 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 PROSER3Q2NL68 480 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 ZNF618Q5T7W0 954 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 CEP85Q6P2H3 762 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 TNPO1Q92973 898 aaKnown RBP4.54□□□□□ -1.68
LINC02541-201ENST00000427157 SLC13A1Q9BZW2 595 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 SH3BP4Q9P0V3 963 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 ABCF2Q9UG63 623 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 ZDHHC8Q9ULC8 765 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 POLHQ9Y253 713 aa4.54□□□□□ -1.68
LINC02541-201ENST00000427157 TNKSO95271 1327 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 TISP43B9A030 160 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 H0YIZ8 118 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 JTBO76095 146 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 ARIH2O95376 493 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 KELP23276 732 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 SLC44A4Q53GD3 710 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 TEDDM1Q5T9Z0 273 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 SLC29A4Q7RTT9 530 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 MAVSQ7Z434 540 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 NEK8Q86SG6 692 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 USP37Q86T82 979 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 MIER2Q8N344 545 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 RGMAQ96B86 450 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 SEMA4CQ9C0C4 833 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 MRPL46Q9H2W6 279 aaKnown RBP4.53□□□□□ -1.68
LINC02541-201ENST00000427157 WDCPQ9H6R7 721 aa4.53□□□□□ -1.68
LINC02541-201ENST00000427157 FEZ2Q9UHY8 353 aaPredicted RBP4.53□□□□□ -1.68
LINC02541-201ENST00000427157 GNAI2P04899 355 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 MPGP29372 298 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 CLCN2P51788 898 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 ZNF134P52741 427 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 ETFDHQ16134 617 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 C11orf87Q6NUJ2 197 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 ANKRD16Q6P6B7 361 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 TMEM108Q6UXF1 575 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 HEATR3Q7Z4Q2 680 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 YTHDF3Q7Z739 585 aaKnown RBP4.52□□□□□ -1.69
LINC02541-201ENST00000427157 PPP1R3BQ86XI6 285 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 PRPF38AQ8NAV1 312 aaKnown RBP4.52□□□□□ -1.69
LINC02541-201ENST00000427157 FAM46DQ8NEK8 389 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.52□□□□□ -1.69
LINC02541-201ENST00000427157 BTBD3Q9Y2F9 522 aa4.52□□□□□ -1.69
LINC02541-201ENST00000427157 SMIM22K7EJ46 135 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms