RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 IRF2BP1Q8IU81 584 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 TTC9BQ8N6N2 239 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 ADAM7Q9H2U9 754 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 CRISPLD1Q9H336 500 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 SNX25Q9H3E2 840 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 APOBEC3GQ9HC16 384 aaKnown RBP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 TMLHEQ9NVH6 421 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 STX10O60499 249 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 ASS1P00966 412 aaKnown RBP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 GTF2H1P32780 548 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 MYL7Q01449 175 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 GPR17Q13304 367 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 STX1AQ16623 288 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 ATAT1Q5SQI0 421 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 TMEM86AQ8N2M4 240 aa13.42□□□□□ -0.26
SMIM12-203ENST00000426886 SMG7Q92540 1137 aaKnown RBP13.42□□□□□ -0.26
SMIM12-203ENST00000426886 TCF20Q9UGU0 1960 aaKnown RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 MYBPHLA2RUH7 354 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 A8MXQ7 604 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 GNA14O95837 355 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 CD58P19256 250 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 MTIF2P46199 727 aaKnown RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 LHX1P48742 406 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 FMO5P49326 533 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 TSPY1Q01534 308 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 TATDN2Q93075 761 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 RPGRIP1Q96KN7 1286 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 ZCWPW1Q9H0M4 648 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 AFF4Q9UHB7 1163 aaKnown RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 NFE2L3Q9Y4A8 694 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 NME7Q9Y5B8 376 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 GABRDO14764 452 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 ZMYND10O75800 440 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 VNN2O95498 520 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 CBX2Q14781 532 aaPredicted RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 FOXR2Q6PJQ5 311 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 SEPT5Q99719 369 aaPredicted RBP13.41□□□□□ -0.26
SMIM12-203ENST00000426886 ACBD6Q9BR61 282 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 CRACR2AQ9BSW2 395 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
SMIM12-203ENST00000426886 TRIOO75962 3097 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 NTHL1P78549 312 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ITIH3Q06033 890 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 MGAT5BQ3V5L5 792 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ANO6Q4KMQ2 910 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 GRASPQ7Z6J2 395 aaPredicted RBP13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ZNF707Q96C28 371 aaPredicted RBP13.4□□□□□ -0.26
SMIM12-203ENST00000426886 RHOBTB2Q9BYZ6 727 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
SMIM12-203ENST00000426886 PLXNA3P51805 1871 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 LRG1P02750 347 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 P4HA1P13674 534 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 PCSK1P29120 753 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ASPAP45381 313 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 TWF1Q12792 350 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 GPR149Q86SP6 731 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 DCP1BQ8IZD4 617 aaKnown RBP13.4□□□□□ -0.26
SMIM12-203ENST00000426886 STKLD1Q8NE28 680 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ST13P5Q8NFI4 369 aaPredicted RBP13.4□□□□□ -0.26
SMIM12-203ENST00000426886 ARID3AQ99856 593 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 PRKD2Q9BZL6 878 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
SMIM12-203ENST00000426886 NCOR1O75376 2440 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 PTMSP20962 102 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 ENPEPQ07075 957 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 INTS6LQ5JSJ4 861 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 INSL5Q9Y5Q6 135 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms