RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 CTTNBP2NLQ9P2B4 639 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 SCN5AQ14524 2016 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
GINS3-203ENST00000426538 WARSP23381 471 aaKnown RBP16.05■□□□□ 0.16
GINS3-203ENST00000426538 LIN9Q5TKA1 542 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 ADAM22Q9P0K1 906 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 GTF3C4Q9UKN8 822 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 STXBP5LQ9Y2K9 1186 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 JRKLQ9Y4A0 524 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 TET1Q8NFU7 2136 aa16.05■□□□□ 0.16
GINS3-203ENST00000426538 ARHGEF37A1IGU5 675 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 PALMO75781 387 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 LHX1P48742 406 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 TCTN1Q2MV58 587 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 WSCD1Q658N2 575 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 ZNF280BQ86YH2 543 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 C3orf58Q8NDZ4 430 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 CNOT8Q9UFF9 292 aaKnown RBP16.04■□□□□ 0.16
GINS3-203ENST00000426538 NCANO14594 1321 aa16.04■□□□□ 0.16
GINS3-203ENST00000426538 ENC1O14682 589 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 KIAA0355O15063 1070 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 FANCGO15287 622 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 DDHD2O94830 711 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 ODC1P11926 461 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 EN2P19622 333 aaPredicted RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 IGFBP6P24592 240 aaPredicted RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 LMO2P25791 158 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 CDH5P33151 784 aaPredicted RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 OR1G1P47890 313 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
GINS3-203ENST00000426538 PAN2Q504Q3 1202 aaKnown RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 TIGD5Q53EQ6 642 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 ERICH1Q86X53 443 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 METTL23Q86XA0 190 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 PHF13Q86YI8 300 aaPredicted RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 SYCE1Q8N0S2 351 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 CRYBG2Q8N1P7 616 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 TMEM199Q8N511 208 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
GINS3-203ENST00000426538 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 OSGEPQ9NPF4 335 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.03■□□□□ 0.16
GINS3-203ENST00000426538 PCDHGC5Q9Y5F6 944 aa16.03■□□□□ 0.16
GINS3-203ENST00000426538 TRIM43BA6NCK2 446 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 M0QYV0 167 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 O00370 1275 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 MICAL2O94851 1124 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 CYP1A2P05177 515 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 CALB1P05937 261 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
GINS3-203ENST00000426538 DSC1Q08554 894 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 TCEAL1Q15170 157 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 PPP1R26Q5T8A7 1209 aaPredicted RBP16.02■□□□□ 0.16
GINS3-203ENST00000426538 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 DENND1BQ6P3S1 775 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 MON1BQ7L1V2 547 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 COLGALT2Q8IYK4 626 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 TRIM43Q96BQ3 446 aaPredicted RBP16.02■□□□□ 0.16
GINS3-203ENST00000426538 CASD1Q96PB1 797 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 C11orf70Q9BRQ4 267 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.16
GINS3-203ENST00000426538 DDX43Q9NXZ2 648 aaKnown RBP16.02■□□□□ 0.16
GINS3-203ENST00000426538 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 HESX1Q9UBX0 185 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 DSEQ9UL01 958 aa16.02■□□□□ 0.16
GINS3-203ENST00000426538 MYH10P35580 1976 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 GABRDO14764 452 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.15
GINS3-203ENST00000426538 UPP2O95045 317 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 ALDH2P05091 517 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 MMP8P22894 467 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 TUBB2AQ13885 445 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 MMS22LQ6ZRQ5 1243 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 WDTC1Q8N5D0 677 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 HASPINQ8TF76 798 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 TUBB2BQ9BVA1 445 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 NUP85Q9BW27 656 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 MRPL47Q9HD33 250 aaKnown RBP16.02■□□□□ 0.15
GINS3-203ENST00000426538 AVENQ9NQS1 362 aaPredicted RBP16.02■□□□□ 0.15
GINS3-203ENST00000426538 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 PRKAG2Q9UGJ0 569 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 NME7Q9Y5B8 376 aa16.02■□□□□ 0.15
GINS3-203ENST00000426538 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.15
GINS3-203ENST00000426538 TTC3P53804 2025 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms