RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SLMAPQ14BN4 828 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 LRRC14Q15048 493 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 UBR7Q8N806 425 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 FAM49AQ9H0Q0 323 aaPredicted RBP12.23□□□□□ -0.45
UBR4-207ENST00000425413 PSMA2P25787 234 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 POLR2BP30876 1174 aaKnown RBP12.23□□□□□ -0.45
UBR4-207ENST00000425413 PSMC1P62191 440 aaKnown RBP12.23□□□□□ -0.45
UBR4-207ENST00000425413 KLF1Q13351 362 aaPredicted RBP12.23□□□□□ -0.45
UBR4-207ENST00000425413 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 P3H1Q32P28 736 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 IZUMO3Q5VZ72 239 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 KCNV1Q6PIU1 500 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 KATNAL2Q8IYT4 538 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 MROH8Q9H579 483 aa12.23□□□□□ -0.45
UBR4-207ENST00000425413 GMNCA6NCL1 334 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 GOLGA8MH3BSY2 632 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 PDHXO00330 501 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 GRAP2O75791 330 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 CALB1P05937 261 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 PHKA2P46019 1235 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 AP3M2P53677 418 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 EXD1Q8NHP7 514 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 TLCD1Q96CP7 247 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 VCPIP1Q96JH7 1222 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 CPXM1Q96SM3 734 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 SYT17Q9BSW7 474 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 AGAP1Q9UPQ3 857 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 ARF4P18085 180 aaPredicted RBP12.22□□□□□ -0.45
UBR4-207ENST00000425413 PROZP22891 400 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 PTK6Q13882 451 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 BYSLQ13895 437 aaKnown RBP12.22□□□□□ -0.45
UBR4-207ENST00000425413 KIZQ2M2Z5 673 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 KIAA0319LQ8IZA0 1049 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
UBR4-207ENST00000425413 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 GRK7Q8WTQ7 553 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 MAIP1Q8WWC4 291 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 HEXIM2Q96MH2 286 aaKnown RBP12.22□□□□□ -0.45
UBR4-207ENST00000425413 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 SLITRK1Q96PX8 696 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 TMEM121Q9BTD3 319 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 OTOFQ9HC10 1997 aa12.22□□□□□ -0.45
UBR4-207ENST00000425413 ASB14A6NK59 587 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 KRT3P12035 628 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 ITIH2P19823 946 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 CETN2P41208 172 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 AUHQ13825 339 aaKnown RBP12.21□□□□□ -0.45
UBR4-207ENST00000425413 TAF5Q15542 800 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 CPLX4Q7Z7G2 160 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 ANKRD42Q8N9B4 389 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 JPH2Q9BR39 696 aaPredicted RBP12.21□□□□□ -0.45
UBR4-207ENST00000425413 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 METTL5Q9NRN9 209 aaKnown RBP12.21□□□□□ -0.45
UBR4-207ENST00000425413 WHRNQ9P202 907 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.45
UBR4-207ENST00000425413 M0QYV0 167 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 TRAPPC3O43617 180 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 GAS2O43903 313 aaKnown RBP12.21□□□□□ -0.45
UBR4-207ENST00000425413 B4GALT4O60513 344 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 PIAS1O75925 651 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 KIAA0754O94854 1291 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 FAM107AO95990 144 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 CD48P09326 243 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 GBP1P32455 592 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 RAD23BP54727 409 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 CCNG2Q16589 344 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 SYCP2LQ5T4T6 812 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 EMC10Q5UCC4 262 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 TAPT1Q6NXT6 567 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 SPOCD1Q6ZMY3 1216 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 PDZD7Q9H5P4 517 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 HES2Q9Y543 173 aa12.21□□□□□ -0.45
UBR4-207ENST00000425413 A0A087WUV0 522 aaPredicted RBP12.21□□□□□ -0.46
UBR4-207ENST00000425413 A6NNZ2 444 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 BANF1O75531 89 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 IL1R2P27930 398 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 ARSEP51690 589 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 GPS1Q13098 491 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 SURF1Q15526 300 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 CDO1Q16878 200 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 TUBB8Q3ZCM7 444 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 C6orf118Q5T5N4 469 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 C12orf29Q8N999 325 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 HSPH1Q92598 858 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 APOL6Q9BWW8 343 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 MAF1Q9H063 256 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.46
UBR4-207ENST00000425413 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.46
UBR4-207ENST00000425413 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms