RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 PMS1P54277 932 aaKnown RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 EPHB3P54753 998 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZXDAP98168 799 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SMARCB1Q12824 385 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SLC5A9Q2M3M2 681 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZNF699Q32M78 642 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 WDR72Q3MJ13 1102 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MGAT5BQ3V5L5 792 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 INTS6LQ5JSJ4 861 aaKnown RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 LIMS2Q7Z4I7 341 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 C2orf15Q8WU43 125 aaKnown RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZNF512Q96ME7 567 aaPredicted RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ACBD6Q9BR61 282 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 XYLT2Q9H1B5 865 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 TMLHEQ9NVH6 421 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 NXF1Q9UBU9 619 aaKnown RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CDH7Q9ULB5 785 aa23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MRPS23Q9Y3D9 190 aaKnown RBP23.93■■□□□ 1.42
PTCHD3P2-201ENST00000424937 GABRDO14764 452 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 IKBKBO14920 756 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 VNN1O95497 513 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 LAMP2P13473 410 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CD44P16070 742 aaKnown RBP23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MTMR3Q13615 1198 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CAMK4Q16566 473 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZACNQ401N2 412 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 C1orf220Q5T0J3 134 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ANKRD40Q6AI12 368 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 KLHL10Q6JEL2 608 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PDZD4Q76G19 769 aaPredicted RBP23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 HS6ST3Q8IZP7 471 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SPPL2BQ8TCT7 592 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 EDAQ92838 391 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 FGF13Q92913 245 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MKNK1Q9BUB5 465 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MMRN2Q9H8L6 949 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 C11orf16Q9NQ32 467 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ASAH2Q9NR71 780 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 HSFX1Q9UBD0 423 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 OBSL1O75147 1896 aa23.92■■□□□ 1.42
PTCHD3P2-201ENST00000424937 TRIOO75962 3097 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 DENND4CQ5VZ89 1909 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 WARSP23381 471 aaKnown RBP23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PPP1R2P41236 205 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PIK3CAP42336 1068 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 LRRC63Q05C16 580 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MORC3Q14149 939 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CCDC142Q17RM4 750 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 TMEM31Q5JXX7 168 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CLEC17AQ6ZS10 378 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SV2AQ7L0J3 742 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ELMO3Q96BJ8 720 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SYT15Q9BQS2 421 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MRPL45Q9BRJ2 306 aaKnown RBP23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 DNAJC25Q9H1X3 360 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SMOC2Q9H3U7 446 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 KCNK12Q9HB15 430 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PCDHB5Q9Y5E4 795 aa23.91■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MYL4P12829 197 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CEBPBP17676 345 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 BMP6P22004 513 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CCNE1P24864 410 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 GCLMP48507 274 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 TUFMP49411 452 aaKnown RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PSMC1P62191 440 aaKnown RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 FKBP3Q00688 224 aaKnown RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ENPEPQ07075 957 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 NFE2Q16621 373 aaPredicted RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZNF667Q5HYK9 610 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 CYP4A22Q5TCH4 519 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SCARA5Q6ZMJ2 495 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 NPAS3Q8IXF0 933 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 TCEAL4Q96EI5 215 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 DHTKD1Q96HY7 919 aaPredicted RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 PKMYT1Q99640 499 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SNX25Q9H3E2 840 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 SMYD3Q9H7B4 428 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 AVENQ9NQS1 362 aaPredicted RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 IGSF9Q9P2J2 1179 aa23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZFP37Q9Y6Q3 630 aaPredicted RBP23.9■■□□□ 1.42
PTCHD3P2-201ENST00000424937 MYH10P35580 1976 aa23.89■■□□□ 1.42
PTCHD3P2-201ENST00000424937 GREB1Q4ZG55 1949 aa23.89■■□□□ 1.42
PTCHD3P2-201ENST00000424937 ZNF197O14709 1029 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 SLC16A3O15427 465 aaKnown RBP23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 TACC1O75410 805 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 HLA-DRAP01903 254 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 PDGFRBP09619 1106 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 HAPLN1P10915 354 aaPredicted RBP23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 ATF6P18850 670 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 LMO2P25791 158 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 PPP3CAQ08209 521 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 PRSS36Q5K4E3 855 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 ZC3H3Q8IXZ2 948 aaKnown RBP23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 ST13P5Q8NFI4 369 aaPredicted RBP23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 OR6B3Q8NGW1 331 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 FAM200AQ8TCP9 573 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 RSAD2Q8WXG1 361 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 GBP4Q96PP9 640 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 LPIN3Q9BQK8 851 aa23.89■■□□□ 1.41
PTCHD3P2-201ENST00000424937 PI4K2AQ9BTU6 479 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms