RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 DRD1P21728 446 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 CDC25AP30304 524 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 RUNX3Q13761 415 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 CCDC6Q16204 474 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 FSTL4Q6MZW2 842 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 C11orf74Q86VG3 221 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 CMTM8Q8IZV2 173 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 SENP8Q96LD8 212 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 CCSER1Q9C0I3 900 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 ZCWPW1Q9H0M4 648 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 SLC27A5Q9Y2P5 690 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 DERAQ9Y315 318 aa16.88■□□□□ 0.29
RPUSD3-204ENST00000424438 SCN1AP35498 2009 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 SRRM3A6NNA2 597 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 FOSBP53539 338 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 NCKAP1LP55160 1127 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 POU5F1Q01860 360 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 ELF2Q15723 593 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 PKN3Q6P5Z2 889 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 TTC9BQ8N6N2 239 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 SYT2Q8N9I0 419 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 CHFRQ96EP1 664 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 MMTAG2Q9BU76 263 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 HAPLN2Q9GZV7 340 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 HPS4Q9NQG7 708 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 GKN1Q9NS71 199 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
RPUSD3-204ENST00000424438 MYO16Q9Y6X6 1858 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ANO9A1A5B4 782 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 PIRO00625 290 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 OGTO15294 1046 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 RHOBTB1O94844 696 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ATF6P18850 670 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ABCD1P33897 745 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 RING1Q06587 406 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 SEZ6Q53EL9 994 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 SYT13Q7L8C5 426 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 KCNK18Q7Z418 384 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 CCDC26Q8TAB7 109 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 ZCCHC14Q8WYQ9 949 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 DUSP15Q9H1R2 295 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 WASF3Q9UPY6 502 aa16.86■□□□□ 0.29
RPUSD3-204ENST00000424438 BCLAF3A2AJT9 711 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 LACTBL1A8MY62 500 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 SLC26A4O43511 780 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 F11P03951 625 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 NEK4P51957 841 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 OR10T2Q8NGX3 314 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 TTC8Q8TAM2 541 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 ACDQ96AP0 544 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 TDP1Q9NUW8 608 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 ODF2LQ9ULJ1 636 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 TCHHQ07283 1943 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 PCNX2A6NKB5 2137 aa16.85■□□□□ 0.29
RPUSD3-204ENST00000424438 ABCA7Q8IZY2 2146 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 ASCC3Q8N3C0 2202 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 A0A0B4J269 797 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 SFI1A8K8P3 1242 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 RNF40O75150 1001 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 APBB3O95704 486 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 HAPLN1P10915 354 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 CSRP1P21291 193 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 HOXC13P31276 330 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 AVPR1AP37288 418 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 CYP4F8P98187 520 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 DAB2IPQ5VWQ8 1189 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 C9orf57Q5W0N0 161 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 DTHD1Q6ZMT9 781 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 LPIN3Q9BQK8 851 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 EDEM2Q9BV94 578 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 ASB7Q9H672 318 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 C2CD2Q9Y426 696 aa16.84■□□□□ 0.29
RPUSD3-204ENST00000424438 PPEF2O14830 753 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 SOAT2O75908 522 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 SPINK2P20155 84 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 TNFSF9P41273 254 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 TOB1P50616 345 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 SLC12A3P55017 1021 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 NLRP12P59046 1061 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 SPAG1Q07617 926 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 BFSP1Q12934 665 aa16.83■□□□□ 0.28
RPUSD3-204ENST00000424438 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms