RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 BANPQ8N9N5 519 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 BSNDQ8WZ55 320 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 PTCD3Q96EY7 689 aaKnown RBP16.03■□□□□ 0.16
C9orf3-204ENST00000424143 FNBP1Q96RU3 617 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 PAIP2Q9BPZ3 127 aaKnown RBP16.03■□□□□ 0.16
C9orf3-204ENST00000424143 BTBD10Q9BSF8 475 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 DENND2DQ9H6A0 471 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-204ENST00000424143 VPS37BQ9H9H4 285 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 SLCO1B3Q9NPD5 702 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 SIP14410 1827 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 HNRNPDLO14979 420 aaKnown RBP16.02■□□□□ 0.16
C9orf3-204ENST00000424143 SPAG6O75602 509 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 LINGO3P0C6S8 592 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 VHLP40337 213 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 CDKN2BP42772 138 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 HIF1AQ16665 826 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 NBPF20Q3BBV1 942 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 PPP1R15BQ5SWA1 713 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 TDRD10Q5VZ19 366 aaKnown RBP16.02■□□□□ 0.16
C9orf3-204ENST00000424143 FAM83AQ86UY5 434 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 DNAJC9Q8WXX5 260 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 NSL1Q96IY1 281 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 AGBL1Q96MI9 1066 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 OSBPL1AQ9BXW6 950 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
C9orf3-204ENST00000424143 TRIM55Q9BYV6 548 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 SPATS2LQ9NUQ6 558 aaKnown RBP16.02■□□□□ 0.16
C9orf3-204ENST00000424143 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.16
C9orf3-204ENST00000424143 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.02■□□□□ 0.16
C9orf3-204ENST00000424143 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 NFIBO00712 420 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 VNN1O95497 513 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 KRT1P04264 644 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 ASNSP08243 561 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CD58P19256 250 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PIK3CAP42336 1068 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 GPX6P59796 221 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 SLC18A2Q05940 514 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 KLC1Q07866 573 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PDIA2Q13087 525 aaKnown RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 WDR72Q3MJ13 1102 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 TAS1R3Q7RTX0 852 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 MTMR14Q8NCE2 650 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF483Q8TF39 744 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FAM136AQ96C01 138 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FAM213AQ9BRX8 229 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PI4K2AQ9BTU6 479 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CCDC28BQ9BUN5 200 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 SLC38A10Q9HBR0 1119 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 LRCH1Q9Y2L9 728 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CLUHO75153 1309 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FAM170AA1A519 330 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 LRRD1A4D1F6 860 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 SIGLEC16A6NMB1 481 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 A8MXQ7 604 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 GSTA2P09210 222 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 EPHB2P29323 1055 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PTDSS1P48651 473 aaKnown RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 CCNHP51946 323 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 DLGAP5Q15398 846 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FAM182BQ5T319 152 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 ZBED8Q8IZ13 594 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 KIRREL3Q8IZU9 778 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FNIP1Q8TF40 1166 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 SH3GL3Q99963 347 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FRMD8Q9BZ67 464 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-204ENST00000424143 MANSC1Q9H8J5 431 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 FBXO28Q9NVF7 368 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 KANSL3Q9P2N6 904 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 PCDHGC3Q9UN70 934 aa16.01■□□□□ 0.15
C9orf3-204ENST00000424143 F8W8V4 182 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 GSC2O15499 205 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 HAUS5O94927 633 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 WEE2P0C1S8 567 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 KRT4P19013 534 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 ATP4AP20648 1035 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 PCK1P35558 622 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 CDK16Q00536 496 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 SEPT7Q16181 437 aaKnown RBP16■□□□□ 0.15
C9orf3-204ENST00000424143 MAPK6Q16659 721 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 WDR78Q5VTH9 848 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 PLA2G4FQ68DD2 849 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 BBS12Q6ZW61 710 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 PRUNE1Q86TP1 453 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 TRIM42Q8IWZ5 723 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 C4orf33Q8N1A6 199 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 ARHGAP24Q8N264 748 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 GLIS1Q8NBF1 620 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 PYROXD1Q8WU10 500 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms