RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 CSGALNACT2Q8N6G5 542 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 ZNF507Q8TCN5 953 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 CACTINQ8WUQ7 758 aaKnown RBP16.35■□□□□ 0.21
USB1-202ENST00000423271 RSPRY1Q96DX4 576 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
USB1-202ENST00000423271 MAGEF1Q9HAY2 307 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 HEBP1Q9NRV9 189 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 TMLHEQ9NVH6 421 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
USB1-202ENST00000423271 FAM13BQ9NYF5 915 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 HSFX1Q9UBD0 423 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 ITGA11Q9UKX5 1188 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 CFAP54Q96N23 3096 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 TICRRQ7Z2Z1 1910 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
USB1-202ENST00000423271 FAM186AA6NE01 2351 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 SHISA7A6NL88 538 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 KIAA0391O15091 583 aaKnown RBP16.34■□□□□ 0.21
USB1-202ENST00000423271 TGFB1I1O43294 461 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 HCRTO43612 131 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 TMEM191BP0C7N4 346 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 UBXN2BQ14CS0 331 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 CCDC142Q17RM4 750 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 ASCL5Q7RTU5 278 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 OSTM1Q86WC4 334 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 MKNK1Q9BUB5 465 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 TRMT61BQ9BVS5 477 aaKnown RBP16.34■□□□□ 0.21
USB1-202ENST00000423271 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 TRPV4Q9HBA0 871 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 AGPAT3Q9NRZ7 376 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 ASB3Q9Y575 518 aa16.34■□□□□ 0.21
USB1-202ENST00000423271 ZNF233A6NK53 670 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 HEPACAM2A8MVW5 462 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 CLIC2O15247 247 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 PSMC3P17980 439 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
USB1-202ENST00000423271 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
USB1-202ENST00000423271 GABRR2P28476 465 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 GDI1P31150 447 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 TUFMP49411 452 aaKnown RBP16.33■□□□□ 0.2
USB1-202ENST00000423271 GPR15P49685 360 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 CYP4F8P98187 520 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 ITIH5Q86UX2 942 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 STKLD1Q8NE28 680 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 SPPL2BQ8TCT7 592 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 GIPC2Q8TF65 315 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 DNASE1L2Q92874 299 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 ATXN3LQ9H3M9 355 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 IL21Q9HBE4 155 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 SLC39A2Q9NP94 309 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 SERTAD1Q9UHV2 236 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 SNX9Q9Y5X1 595 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 UBE4BO95155 1302 aa16.33■□□□□ 0.2
USB1-202ENST00000423271 NUP210Q8TEM1 1887 aaPredicted RBP16.33■□□□□ 0.2
USB1-202ENST00000423271 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 FAM170BA6NMN3 283 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 HUS1O60921 280 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 HAPLN1P10915 354 aaPredicted RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 CYP2J2P51589 502 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 RBP5P82980 135 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 TSPY1Q01534 308 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 VEPH1Q14D04 833 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 SNRNP35Q16560 246 aaKnown RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 DCP1BQ8IZD4 617 aaKnown RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 C2orf15Q8WU43 125 aaKnown RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 DEPDC1BQ8WUY9 529 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 GDAP2Q9NXN4 497 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
USB1-202ENST00000423271 PCDHB5Q9Y5E4 795 aa16.32■□□□□ 0.2
USB1-202ENST00000423271 TNNC2P02585 160 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 CMA1P23946 247 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 SMARCB1Q12824 385 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 BMT2Q1RMZ1 405 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 INTS6LQ5JSJ4 861 aaKnown RBP16.31■□□□□ 0.2
USB1-202ENST00000423271 GPR158Q5T848 1215 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 SDHAF4Q5VUM1 108 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 WDR49Q8IV35 697 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 ARID3BQ8IVW6 561 aaPredicted RBP16.31■□□□□ 0.2
USB1-202ENST00000423271 C1orf210Q8IVY1 113 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 ADGRF2Q8IZF7 708 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 TOP6BLQ8N6T0 577 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 IRF7Q92985 503 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms