RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 NSMCE1Q8WV22 266 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 C12orf65Q9H3J6 166 aaKnown RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 ETNK1Q9HBU6 452 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 NFASCO94856 1347 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ADGRA2Q96PE1 1338 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 SPATA31C2B4DYI2 1134 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 TGFB2P61812 414 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ENPEPQ07075 957 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 OASLQ15646 514 aaKnown RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 RNASEH2BQ5TBB1 312 aaKnown RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 RNF43Q68DV7 783 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 DENND1AQ8TEH3 1009 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 TFAP2BQ92481 460 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ERP27Q96DN0 273 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 TCHPQ9BT92 498 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 TARSP26639 723 aaKnown RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 SSTR1P30872 391 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 NAMPTP43490 491 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 ZNF132P52740 706 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 LMNB2Q03252 620 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 CAPSQ13938 189 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 ANKRD22Q5VYY1 191 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 SLFN12LQ6IEE8 588 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 ERICH1Q86X53 443 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 MAK16Q9BXY0 300 aaKnown RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 IMPG2Q9BZV3 1241 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 ZWILCHQ9H900 591 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 TCRBV5S1A1TA0A578 114 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 GBP2P32456 591 aaPredicted RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 ARL2P36404 184 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 CDKN2BP42772 138 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 NRLP54845 237 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 GNPTABQ3T906 1256 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 MSS51Q4VC12 460 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 L3MBTL3Q96JM7 780 aaPredicted RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 SMC6Q96SB8 1091 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 TACO1Q9BSH4 297 aaKnown RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 CISHQ9NSE2 258 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 CHKBQ9Y259 395 aa16.65■□□□□ 0.26
CDH1-202ENST00000422392 MAFBQ9Y5Q3 323 aaPredicted RBP16.65■□□□□ 0.26
CDH1-202ENST00000422392 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 UNC5CO95185 931 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 ALADP13716 330 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 HIRAP54198 1017 aaPredicted RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 GPX6P59796 221 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 ORC1Q13415 861 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 TNFAIP1Q13829 316 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 RIBC1Q8N443 379 aaPredicted RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 UTP4Q969X6 686 aaKnown RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 EBF2Q9HAK2 575 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 WDR91A4D1P6 747 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 LDHAP00338 332 aaKnown RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 ASS1P00966 412 aaKnown RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 TFDP1Q14186 410 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 SPARCL1Q14515 664 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 MORF4L2Q15014 288 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 CDR2LQ86X02 465 aaPredicted RBP16.64■□□□□ 0.25
CDH1-202ENST00000422392 UBR7Q8N806 425 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 HAO1Q9UJM8 370 aa16.64■□□□□ 0.25
CDH1-202ENST00000422392 GOLGA8RI6L899 631 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 PIGRP01833 764 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CD48P09326 243 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CCNB1P14635 433 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 PTPRAP18433 802 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 RFC1P35251 1148 aaPredicted RBP16.63■□□□□ 0.25
CDH1-202ENST00000422392 OSTNP61366 133 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 FNBP1LQ5T0N5 605 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 VSIG1Q86XK7 387 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 KLF6Q99612 283 aaPredicted RBP16.63■□□□□ 0.25
CDH1-202ENST00000422392 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CLUHO75153 1309 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 DIAPH2O60879 1101 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CALB1P05937 261 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 KRT4P19013 534 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 IL1R2P27930 398 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 CDC25CP30307 473 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 OTUD4Q01804 1114 aaKnown RBP16.63■□□□□ 0.25
CDH1-202ENST00000422392 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 DRICH1Q6PGQ1 229 aaPredicted RBP16.63■□□□□ 0.25
CDH1-202ENST00000422392 EMC1Q8N766 993 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 JOSD2Q8TAC2 188 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms